Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10828844	0.98[ASN][1000 genomes]
rs10828845	0.93[ASN][1000 genomes]
rs10828846	0.93[ASN][1000 genomes]
rs10828847	0.93[ASN][1000 genomes]
rs16926240	0.98[ASN][1000 genomes]
rs16926262	0.93[ASN][1000 genomes]
rs16926264	0.93[ASN][1000 genomes]
rs17737307	0.88[ASN][1000 genomes]
rs2367979	0.91[ASN][1000 genomes]
rs4749059	0.98[ASN][1000 genomes]
rs55752620	0.98[ASN][1000 genomes]
rs61613087	0.98[ASN][1000 genomes]
rs61846904	0.98[ASN][1000 genomes]
rs61846907	0.98[ASN][1000 genomes]
rs61846908	0.93[ASN][1000 genomes]
rs62000980	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6482509	0.98[ASN][1000 genomes]
rs7076933	0.98[ASN][1000 genomes]
rs7080019	0.93[ASN][1000 genomes]
rs7098875	0.98[ASN][1000 genomes]
rs7099373	0.93[ASN][1000 genomes]
rs72796380	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73610338	0.93[ASN][1000 genomes]
rs7916640	0.90[ASN][1000 genomes]
rs9664692	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044482	chr10:25889919-25977270	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25952400-25952800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

Quick Search: