Variant report

Variant rs72801052
Chromosome Location chr5:142687699-142687700
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:142655800-142699200 Strong transcription Dnd41 blood
2 chr5:142657800-142695400 Weak transcription Pancreas Pancrea
3 chr5:142658200-142694800 Weak transcription Right Ventricle heart
4 chr5:142658400-142714800 Weak transcription Esophagus oesophagus
5 chr5:142659800-142692600 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr5:142664400-142693400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr5:142667400-142688800 Strong transcription Primary monocytes fromperipheralblood blood
8 chr5:142668600-142688800 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr5:142668800-142693800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr5:142674400-142688200 Weak transcription Psoas Muscle Psoas
11 chr5:142677600-142697800 Weak transcription Fetal Brain Male brain
12 chr5:142678200-142695400 Weak transcription Gastric stomach
13 chr5:142678400-142689200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr5:142678400-142691400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:142678400-142693400 Weak transcription Aorta Aorta
16 chr5:142678400-142693400 Weak transcription Rectal Smooth Muscle rectum
17 chr5:142678400-142693600 Weak transcription Brain Angular Gyrus brain
18 chr5:142678400-142693800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:142678600-142688200 Weak transcription Brain Cingulate Gyrus brain
20 chr5:142680200-142688200 Weak transcription Stomach Smooth Muscle stomach
21 chr5:142680200-142689000 Weak transcription Small Intestine intestine
22 chr5:142680200-142691000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:142680200-142691400 Weak transcription Ovary ovary
24 chr5:142680200-142691600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr5:142680200-142691800 Weak transcription Brain Substantia Nigra brain
26 chr5:142680400-142688400 Weak transcription Colon Smooth Muscle Colon
27 chr5:142680400-142690800 Weak transcription HepG2 liver
28 chr5:142681000-142689600 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr5:142681800-142687800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr5:142682000-142691200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr5:142682400-142688000 Weak transcription HSMMtube muscle
32 chr5:142682400-142689200 Weak transcription HUVEC blood vessel
33 chr5:142682600-142698400 Weak transcription Stomach Mucosa stomach
34 chr5:142682800-142691400 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr5:142683200-142693800 Strong transcription Primary T cells from cord blood blood
36 chr5:142683200-142693800 Strong transcription Fetal Muscle Trunk muscle
37 chr5:142683200-142693800 Strong transcription Fetal Thymus thymus
38 chr5:142683400-142688200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:142683400-142693000 Strong transcription Primary B cells from peripheral blood blood
40 chr5:142683600-142688200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr5:142683800-142688600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr5:142683800-142689400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr5:142684000-142689200 ZNF genes & repeats GM12878-XiMat blood
44 chr5:142684000-142690800 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr5:142684200-142689600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:142684200-142689800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr5:142684200-142693200 Strong transcription Liver Liver
48 chr5:142684200-142697800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr5:142684400-142693200 Strong transcription Adipose Nuclei Adipose
50 chr5:142684400-142693600 Strong transcription Primary T helper naive cells fromperipheralblood blood

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