The 2.0 version of rSNPBase

Variant report

Variant rs72807775
Chromosome Location chr2:56107673-56107674
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56089200-56112200 Weak transcription Pancreas Pancrea
2 chr2:56092400-56111600 Genic enhancers HUVEC blood vessel
3 chr2:56092800-56107800 Weak transcription Brain Anterior Caudate brain
4 chr2:56092800-56112400 Weak transcription Stomach Smooth Muscle stomach
5 chr2:56092800-56114400 Weak transcription Brain Cingulate Gyrus brain
6 chr2:56093800-56109000 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr2:56094800-56116200 Weak transcription Spleen Spleen
8 chr2:56095600-56109600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:56097000-56108800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:56103200-56108000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:56103400-56110000 Weak transcription A549 lung
12 chr2:56103600-56107800 Weak transcription Fetal Intestine Large intestine
13 chr2:56103800-56109400 Strong transcription HSMM muscle
14 chr2:56104600-56115000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr2:56104800-56109000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr2:56104800-56109000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:56105000-56110400 Weak transcription Muscle Satellite Cultured Cells --
18 chr2:56105000-56112600 Weak transcription HSMMtube muscle
19 chr2:56105800-56109200 Strong transcription NHEK skin
20 chr2:56106000-56108400 Strong transcription Ovary ovary
21 chr2:56106200-56108200 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:56106200-56108400 Genic enhancers Aorta Aorta
23 chr2:56106400-56109000 Strong transcription HMEC breast
24 chr2:56106600-56108800 Strong transcription NH-A brain
25 chr2:56106800-56108400 Strong transcription Fetal Kidney kidney
26 chr2:56106800-56108400 Enhancers Hela-S3 cervix
27 chr2:56106800-56108600 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr2:56107000-56107800 Strong transcription Placenta Amnion Placenta Amnion
29 chr2:56107000-56107800 Enhancers Monocytes-CD14+_RO01746 blood
30 chr2:56107000-56108200 Enhancers Primary monocytes fromperipheralblood blood
31 chr2:56107000-56108200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:56107000-56108400 Genic enhancers NHLF lung
33 chr2:56107000-56109000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:56107000-56109000 Genic enhancers Osteobl bone
35 chr2:56107400-56107800 Enhancers Fetal Lung lung
36 chr2:56107400-56108200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr2:56107400-56108400 Genic enhancers Adipose Nuclei Adipose
38 chr2:56107600-56108200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr2:56107600-56108400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
40 chr2:56107600-56108400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr2:56107600-56108400 Genic enhancers Lung lung
42 chr2:56107600-56108400 Enhancers NHDF-Ad bronchial
43 chr2:56107600-56108600 Enhancers Placenta Placenta
44 chr2:56107600-56108800 Strong transcription Fetal Stomach stomach
45 chr2:56107600-56108800 Enhancers Gastric stomach
46 chr2:56107600-56108800 Enhancers Right Atrium heart
47 chr2:56107600-56114400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015