The 2.0 version of rSNPBase

Variant report

Variant rs72818458
Chromosome Location chr10:61799888-61799889
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61783600-61801200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr10:61786400-61815000 Weak transcription Left Ventricle heart
3 chr10:61788800-61803600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr10:61789000-61819200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr10:61789200-61802800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr10:61789400-61807600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr10:61789600-61802800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr10:61789600-61827800 Weak transcription Fetal Brain Female brain
9 chr10:61790000-61803400 Weak transcription Fetal Brain Male brain
10 chr10:61790200-61835000 Weak transcription Primary T cells from cord blood blood
11 chr10:61791200-61803800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr10:61791200-61814200 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr10:61791600-61828600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr10:61791800-61803400 Weak transcription Stomach Smooth Muscle stomach
15 chr10:61791800-61815400 Weak transcription Fetal Intestine Large intestine
16 chr10:61791800-61829400 Weak transcription Fetal Intestine Small intestine
17 chr10:61791800-61849000 Weak transcription Pancreas Pancrea
18 chr10:61792000-61801200 Weak transcription Brain Cingulate Gyrus brain
19 chr10:61792000-61803000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr10:61792200-61883200 Weak transcription Psoas Muscle Psoas
21 chr10:61792600-61802800 Weak transcription Brain Angular Gyrus brain
22 chr10:61792600-61815000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr10:61792800-61802400 Weak transcription Liver Liver
24 chr10:61792800-61802800 Weak transcription Brain Substantia Nigra brain
25 chr10:61793000-61802400 Weak transcription Brain Hippocampus Middle brain
26 chr10:61793200-61819000 Weak transcription Primary T cells fromperipheralblood blood
27 chr10:61793400-61800200 Weak transcription Fetal Heart heart
28 chr10:61794400-61803400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr10:61794600-61800600 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr10:61795600-61804000 Strong transcription Placenta Placenta
31 chr10:61795800-61802400 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr10:61796000-61834800 Weak transcription H9 Cell Line embryonic stem cell
33 chr10:61796400-61801600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr10:61797000-61803200 Weak transcription HSMMtube muscle
35 chr10:61797200-61819000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr10:61797200-61828200 Weak transcription Fetal Muscle Leg muscle
37 chr10:61797600-61827600 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr10:61797800-61803600 Weak transcription NHDF-Ad bronchial
39 chr10:61798200-61844400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr10:61799000-61800600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr10:61799000-61801600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr10:61799200-61803200 Weak transcription Ovary ovary
43 chr10:61799400-61800600 Enhancers Adipose Nuclei Adipose
44 chr10:61799400-61801400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr10:61799600-61800000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr10:61799600-61800000 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr10:61799600-61800200 Enhancers Stomach Mucosa stomach
48 chr10:61799600-61801600 Enhancers Rectal Mucosa Donor 31 rectum
49 chr10:61799600-61803400 Weak transcription Muscle Satellite Cultured Cells --
50 chr10:61799600-61803600 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015