The 2.0 version of rSNPBase

Variant report

Variant rs72848616
Chromosome Location chr2:128135097-128135098
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128107800-128140200 Weak transcription Gastric stomach
2 chr2:128120800-128139200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:128120800-128142000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr2:128121200-128135200 Weak transcription Osteobl bone
5 chr2:128122200-128142200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:128123400-128135200 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr2:128123400-128137600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr2:128123400-128140400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr2:128123400-128144200 Weak transcription Colonic Mucosa Colon
10 chr2:128124000-128140000 Weak transcription Left Ventricle heart
11 chr2:128124400-128136200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr2:128125800-128136400 Weak transcription Primary T cells fromperipheralblood blood
13 chr2:128127200-128135600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr2:128127200-128136000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:128128000-128144000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr2:128128000-128144000 Weak transcription Rectal Smooth Muscle rectum
17 chr2:128128400-128142200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:128128600-128140000 Weak transcription Aorta Aorta
19 chr2:128129400-128135200 Weak transcription NHDF-Ad bronchial
20 chr2:128129600-128135200 Weak transcription Muscle Satellite Cultured Cells --
21 chr2:128129800-128140200 Weak transcription Right Ventricle heart
22 chr2:128130200-128137400 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr2:128131200-128135600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr2:128131800-128137400 Weak transcription Duodenum Mucosa Duodenum
25 chr2:128131800-128139200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr2:128132200-128135400 Weak transcription Primary T cells from cord blood blood
27 chr2:128132400-128140800 Weak transcription Fetal Lung lung
28 chr2:128132600-128135400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr2:128132800-128135400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr2:128132800-128144000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:128133200-128135600 ZNF genes & repeats Dnd41 blood
32 chr2:128133200-128142400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr2:128133800-128139200 Weak transcription Colon Smooth Muscle Colon
34 chr2:128134000-128135400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
35 chr2:128134200-128136600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:128134200-128140200 Weak transcription Ovary ovary
37 chr2:128134200-128141400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:128134400-128135200 Weak transcription Liver Liver
39 chr2:128134400-128135400 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr2:128134400-128135400 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr2:128134400-128137400 Weak transcription Brain Hippocampus Middle brain
42 chr2:128134400-128140000 Weak transcription Psoas Muscle Psoas
43 chr2:128134400-128140200 Weak transcription Lung lung
44 chr2:128134400-128142200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr2:128134400-128144000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr2:128134600-128135200 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr2:128134600-128135200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr2:128134600-128135200 Weak transcription Primary B cells from cord blood blood
49 chr2:128134600-128135400 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr2:128134600-128135400 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015