The 2.0 version of rSNPBase

Variant report

Variant rs72865016
Chromosome Location chr11:17378082-17378083
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17375400-17379800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr11:17375400-17388800 Weak transcription Spleen Spleen
3 chr11:17375400-17389600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:17375400-17390200 Weak transcription Small Intestine intestine
5 chr11:17375600-17388400 Weak transcription Gastric stomach
6 chr11:17375600-17388600 Weak transcription Left Ventricle heart
7 chr11:17375600-17389000 Weak transcription Pancreas Pancrea
8 chr11:17375800-17387600 Weak transcription Aorta Aorta
9 chr11:17376000-17378200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:17376000-17378400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr11:17376000-17378400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr11:17376000-17378400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr11:17376000-17382400 Weak transcription Fetal Stomach stomach
14 chr11:17376000-17385400 Weak transcription Duodenum Mucosa Duodenum
15 chr11:17376000-17387200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr11:17376000-17387400 Weak transcription Primary T cells from cord blood blood
17 chr11:17376000-17387600 Weak transcription Placenta Placenta
18 chr11:17376000-17387600 Weak transcription Ovary ovary
19 chr11:17376000-17387800 Weak transcription HSMMtube muscle
20 chr11:17376000-17388000 Weak transcription Colonic Mucosa Colon
21 chr11:17376000-17388200 Weak transcription Thymus Thymus
22 chr11:17376000-17388400 Weak transcription Rectal Smooth Muscle rectum
23 chr11:17376000-17388400 Weak transcription Stomach Smooth Muscle stomach
24 chr11:17376000-17389000 Weak transcription NHLF lung
25 chr11:17376000-17389800 Weak transcription Primary T cells fromperipheralblood blood
26 chr11:17376000-17389800 Weak transcription Muscle Satellite Cultured Cells --
27 chr11:17376000-17390000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr11:17376000-17391000 Weak transcription Right Ventricle heart
29 chr11:17376200-17378200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr11:17376200-17379400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr11:17376200-17380000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr11:17376200-17381200 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr11:17376200-17385800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr11:17376200-17390000 Weak transcription Fetal Brain Male brain
35 chr11:17376400-17380400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:17376400-17390000 Weak transcription HUVEC blood vessel
37 chr11:17376400-17390600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr11:17376600-17378400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr11:17376600-17378400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr11:17376600-17378400 Weak transcription Brain Inferior Temporal Lobe brain
41 chr11:17376600-17378400 Weak transcription Osteobl bone
42 chr11:17376600-17379600 ZNF genes & repeats Fetal Intestine Small intestine
43 chr11:17376600-17380200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr11:17376600-17380600 Weak transcription NHEK skin
45 chr11:17376600-17387600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr11:17376600-17387800 Weak transcription NHDF-Ad bronchial
47 chr11:17376600-17388000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr11:17376600-17388000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr11:17376600-17388000 Weak transcription HMEC breast
50 chr11:17376600-17388400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015