Variant report

Variant rs72880871
Chromosome Location chr6:64238309-64238310
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:64236800-64238400 Enhancers Stomach Mucosa stomach
2 chr6:64237000-64238400 Flanking Active TSS A549 lung
3 chr6:64237000-64238400 Transcr. at gene 5' and 3' HepG2 liver
4 chr6:64237000-64238600 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr6:64237000-64240600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:64237200-64238400 Enhancers NHLF lung
7 chr6:64237200-64238400 Enhancers Osteobl bone
8 chr6:64237200-64238600 Enhancers NH-A brain
9 chr6:64237400-64238400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr6:64237400-64238400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:64237400-64238600 Flanking Active TSS NHEK skin
12 chr6:64237400-64238800 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr6:64237600-64238400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:64237600-64238400 Enhancers Duodenum Smooth Muscle Duodenum
15 chr6:64237600-64238400 Enhancers Rectal Mucosa Donor 31 rectum
16 chr6:64237600-64238800 Enhancers GM12878-XiMat blood
17 chr6:64237600-64238800 Flanking Active TSS Hela-S3 cervix
18 chr6:64237600-64240400 Enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr6:64237800-64238400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr6:64237800-64238400 Enhancers Fetal Intestine Large intestine
21 chr6:64237800-64238400 Enhancers Sigmoid Colon Sigmoid Colon
22 chr6:64237800-64238400 Enhancers Stomach Smooth Muscle stomach
23 chr6:64237800-64238600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:64237800-64238800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr6:64237800-64238800 Enhancers Pancreas Pancrea
26 chr6:64237800-64239600 Enhancers Placenta Amnion Placenta Amnion
27 chr6:64238000-64238400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr6:64238000-64238600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:64238000-64239200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr6:64238200-64238400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr6:64238200-64238400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr6:64238200-64239200 Weak transcription Fetal Intestine Small intestine
33 chr6:64238200-64239200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr6:64238200-64239400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr6:64238200-64239400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr6:64238200-64239400 Weak transcription Liver Liver
37 chr6:64238200-64239400 Enhancers HMEC breast

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