Variant report

Variant	rs72881557
Chromosome Location	chr2:37666495-37666496
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs13425396	0.92[EUR][1000 genomes]
rs17020676	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17020693	0.89[EUR][1000 genomes]
rs17020696	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57223658	0.89[EUR][1000 genomes]
rs60003859	0.89[EUR][1000 genomes]
rs61022900	0.86[EUR][1000 genomes]
rs61356018	0.92[EUR][1000 genomes]
rs6708554	0.86[EUR][1000 genomes]
rs6708931	0.86[EUR][1000 genomes]
rs6711805	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6727245	0.89[EUR][1000 genomes]
rs6739990	0.89[EUR][1000 genomes]
rs6741256	0.86[EUR][1000 genomes]
rs6751874	0.89[EUR][1000 genomes]
rs6752214	0.89[EUR][1000 genomes]
rs6752559	0.86[EUR][1000 genomes]
rs6755472	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6755835	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6756253	0.89[EUR][1000 genomes]
rs72865105	1.00[EUR][1000 genomes]
rs72879949	0.86[EUR][1000 genomes]
rs72879952	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72879959	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72879966	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72879969	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72879979	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72879983	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72881514	0.92[EUR][1000 genomes]
rs72881515	0.92[EUR][1000 genomes]
rs72881519	0.92[EUR][1000 genomes]
rs72881552	1.00[EUR][1000 genomes]
rs72881560	1.00[EUR][1000 genomes]
rs7603115	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833814	chr2:37643132-37840247	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links