The 2.0 version of rSNPBase

Variant report

Variant rs72896598
Chromosome Location chr2:184053552-184053553
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:183991000-184055400 Weak transcription Brain Cingulate Gyrus brain
2 chr2:184015000-184062000 Weak transcription Small Intestine intestine
3 chr2:184026000-184054600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr2:184026000-184057600 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:184026600-184058800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:184027600-184057600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:184029200-184054800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr2:184029200-184062800 Weak transcription Rectal Smooth Muscle rectum
9 chr2:184031200-184057600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:184037600-184057600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:184043600-184055400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr2:184044000-184063000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:184044400-184071600 Weak transcription NH-A brain
14 chr2:184045400-184057800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:184045800-184057400 Weak transcription Fetal Kidney kidney
16 chr2:184047200-184056800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:184047400-184054000 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr2:184047400-184056400 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr2:184047800-184059600 Weak transcription Hela-S3 cervix
20 chr2:184047800-184078400 Weak transcription Colon Smooth Muscle Colon
21 chr2:184048400-184055800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr2:184048400-184058400 Strong transcription Dnd41 blood
23 chr2:184048400-184059000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:184048600-184054000 Strong transcription HepG2 liver
25 chr2:184048600-184059800 Weak transcription Stomach Smooth Muscle stomach
26 chr2:184048800-184055000 Strong transcription Liver Liver
27 chr2:184048800-184055800 Weak transcription NHEK skin
28 chr2:184048800-184071800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:184049000-184055200 Weak transcription HSMM muscle
30 chr2:184049000-184055600 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr2:184049000-184056800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:184049000-184056800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr2:184049000-184058000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr2:184049000-184062200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr2:184049000-184072000 Weak transcription Muscle Satellite Cultured Cells --
36 chr2:184049000-184072600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr2:184049000-184078000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:184049400-184059600 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr2:184049400-184062600 Weak transcription HMEC breast
40 chr2:184049600-184055600 Strong transcription Primary T cells from cord blood blood
41 chr2:184049600-184057400 Weak transcription Brain Anterior Caudate brain
42 chr2:184050000-184053800 Strong transcription Fetal Intestine Small intestine
43 chr2:184050000-184053800 Strong transcription Fetal Muscle Trunk muscle
44 chr2:184050000-184054000 Strong transcription Duodenum Mucosa Duodenum
45 chr2:184050000-184054400 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr2:184050000-184056800 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr2:184050200-184054200 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr2:184050200-184054200 Strong transcription Skeletal Muscle Male skeletal muscle
49 chr2:184050200-184056200 Strong transcription Adipose Nuclei Adipose
50 chr2:184050200-184057400 Strong transcription K562 blood

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Last update: Aug 31, 2015