The 2.0 version of rSNPBase

Variant report

Variant rs72896599
Chromosome Location chr2:184054397-184054398
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:183991000-184055400 Weak transcription Brain Cingulate Gyrus brain
2 chr2:184015000-184062000 Weak transcription Small Intestine intestine
3 chr2:184026000-184054600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr2:184026000-184057600 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:184026600-184058800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:184027600-184057600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:184029200-184054800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr2:184029200-184062800 Weak transcription Rectal Smooth Muscle rectum
9 chr2:184031200-184057600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:184037600-184057600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:184043600-184055400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr2:184044000-184063000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:184044400-184071600 Weak transcription NH-A brain
14 chr2:184045400-184057800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:184045800-184057400 Weak transcription Fetal Kidney kidney
16 chr2:184047200-184056800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:184047400-184056400 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr2:184047800-184059600 Weak transcription Hela-S3 cervix
19 chr2:184047800-184078400 Weak transcription Colon Smooth Muscle Colon
20 chr2:184048400-184055800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:184048400-184058400 Strong transcription Dnd41 blood
22 chr2:184048400-184059000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr2:184048600-184059800 Weak transcription Stomach Smooth Muscle stomach
24 chr2:184048800-184055000 Strong transcription Liver Liver
25 chr2:184048800-184055800 Weak transcription NHEK skin
26 chr2:184048800-184071800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:184049000-184055200 Weak transcription HSMM muscle
28 chr2:184049000-184055600 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr2:184049000-184056800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr2:184049000-184056800 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr2:184049000-184058000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:184049000-184062200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:184049000-184072000 Weak transcription Muscle Satellite Cultured Cells --
34 chr2:184049000-184072600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr2:184049000-184078000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:184049400-184059600 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr2:184049400-184062600 Weak transcription HMEC breast
38 chr2:184049600-184055600 Strong transcription Primary T cells from cord blood blood
39 chr2:184049600-184057400 Weak transcription Brain Anterior Caudate brain
40 chr2:184050000-184054400 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr2:184050000-184056800 Strong transcription iPS-20b Cell Line embryonic stem cell
42 chr2:184050200-184056200 Strong transcription Adipose Nuclei Adipose
43 chr2:184050200-184057400 Strong transcription K562 blood
44 chr2:184050400-184054400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr2:184050400-184091600 Weak transcription Psoas Muscle Psoas
46 chr2:184050600-184056600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr2:184050600-184056600 Weak transcription HUVEC blood vessel
48 chr2:184050600-184056800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:184050600-184057600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr2:184050600-184059400 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015