Variant report

Variant	rs72901605
Chromosome Location	chr11:47103877-47103878
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11039165	0.87[ASN][1000 genomes]
rs7116451	0.82[ASN][1000 genomes]
rs7944419	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043108	chr11:47041565-47117248	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47077600-47113200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:47089400-47107000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr11:47089400-47120800	Weak transcription	Hela-S3	cervix
4	chr11:47093800-47105000	Weak transcription	HSMM	muscle
5	chr11:47093800-47105400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr11:47094000-47104000	Weak transcription	Fetal Stomach	stomach
7	chr11:47094000-47105200	Weak transcription	NHEK	skin
8	chr11:47094000-47116400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr11:47094000-47125200	Weak transcription	Fetal Muscle Leg	muscle
10	chr11:47100600-47105200	Weak transcription	NHDF-Ad	bronchial
11	chr11:47100800-47105200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr11:47100800-47105800	Weak transcription	Osteobl	bone
13	chr11:47100800-47121000	Weak transcription	HSMMtube	muscle
14	chr11:47101200-47105200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr11:47101400-47109000	Weak transcription	Primary hematopoietic stem cells	blood
16	chr11:47102200-47105400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr11:47103400-47105400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr11:47103800-47105400	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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