Variant report
| Variant | rs72902540 |
|---|---|
| Chromosome Location | chr2:21217871-21217872 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr2:21217747..21219333-chr2:21221269..21222817,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:47)
| rs_ID | r2[population] |
|---|---|
| rs12713675 | 1.00[EUR][1000 genomes] |
| rs12720770 | 1.00[EUR][1000 genomes] |
| rs12720812 | 1.00[EUR][1000 genomes] |
| rs12720813 | 1.00[EUR][1000 genomes] |
| rs12720852 | 1.00[EUR][1000 genomes] |
| rs12720855 | 1.00[EUR][1000 genomes] |
| rs16988071 | 1.00[EUR][1000 genomes] |
| rs1866043 | 1.00[EUR][1000 genomes] |
| rs340605 | 1.00[EUR][1000 genomes] |
| rs340608 | 1.00[EUR][1000 genomes] |
| rs340614 | 1.00[EUR][1000 genomes] |
| rs548324 | 1.00[EUR][1000 genomes] |
| rs571566 | 1.00[EUR][1000 genomes] |
| rs582107 | 1.00[EUR][1000 genomes] |
| rs59995050 | 1.00[EUR][1000 genomes] |
| rs61072469 | 1.00[EUR][1000 genomes] |
| rs61743299 | 1.00[EUR][1000 genomes] |
| rs642152 | 1.00[EUR][1000 genomes] |
| rs662193 | 1.00[EUR][1000 genomes] |
| rs72654435 | 1.00[EUR][1000 genomes] |
| rs72888848 | 1.00[EUR][1000 genomes] |
| rs72888854 | 1.00[EUR][1000 genomes] |
| rs72888855 | 1.00[EUR][1000 genomes] |
| rs72888859 | 1.00[EUR][1000 genomes] |
| rs72890734 | 1.00[EUR][1000 genomes] |
| rs72890747 | 1.00[EUR][1000 genomes] |
| rs72890758 | 1.00[EUR][1000 genomes] |
| rs72890763 | 1.00[EUR][1000 genomes] |
| rs72890771 | 1.00[EUR][1000 genomes] |
| rs72890775 | 1.00[EUR][1000 genomes] |
| rs72890778 | 1.00[EUR][1000 genomes] |
| rs72890781 | 1.00[EUR][1000 genomes] |
| rs72890784 | 1.00[EUR][1000 genomes] |
| rs72890789 | 1.00[EUR][1000 genomes] |
| rs72890791 | 1.00[EUR][1000 genomes] |
| rs72902534 | 1.00[EUR][1000 genomes] |
| rs72902535 | 1.00[EUR][1000 genomes] |
| rs72902538 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72902541 | 1.00[EUR][1000 genomes] |
| rs72902542 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72902544 | 0.98[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72902548 | 1.00[EUR][1000 genomes] |
| rs73224614 | 1.00[EUR][1000 genomes] |
| rs73226544 | 1.00[EUR][1000 genomes] |
| rs73226553 | 1.00[EUR][1000 genomes] |
| rs73226559 | 1.00[EUR][1000 genomes] |
| rs839914 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:21211200-21218200 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr2:21216400-21225600 | Weak transcription | Aorta | Aorta |
