Variant report
| Variant | rs72912730 |
|---|---|
| Chromosome Location | chr4:125677059-125677060 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs10022783 | 1.00[EUR][1000 genomes] |
| rs10033965 | 1.00[EUR][1000 genomes] |
| rs10212646 | 1.00[EUR][1000 genomes] |
| rs17008761 | 1.00[EUR][1000 genomes] |
| rs17008774 | 1.00[EUR][1000 genomes] |
| rs28373772 | 1.00[EUR][1000 genomes] |
| rs28461891 | 1.00[EUR][1000 genomes] |
| rs28878515 | 1.00[EUR][1000 genomes] |
| rs2893091 | 1.00[EUR][1000 genomes] |
| rs2893108 | 1.00[EUR][1000 genomes] |
| rs56234259 | 1.00[EUR][1000 genomes] |
| rs56276915 | 1.00[EUR][1000 genomes] |
| rs56819477 | 1.00[EUR][1000 genomes] |
| rs57913129 | 1.00[EUR][1000 genomes] |
| rs58495425 | 1.00[EUR][1000 genomes] |
| rs58752358 | 1.00[EUR][1000 genomes] |
| rs58898118 | 1.00[EUR][1000 genomes] |
| rs59571426 | 1.00[EUR][1000 genomes] |
| rs60218356 | 1.00[EUR][1000 genomes] |
| rs72912728 | 0.94[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72912744 | 0.94[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72912745 | 0.94[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72912777 | 1.00[EUR][1000 genomes] |
| rs72923360 | 1.00[EUR][1000 genomes] |
| rs72923361 | 1.00[EUR][1000 genomes] |
| rs72923363 | 1.00[EUR][1000 genomes] |
| rs72923389 | 1.00[EUR][1000 genomes] |
| rs72923400 | 1.00[EUR][1000 genomes] |
| rs73845286 | 1.00[EUR][1000 genomes] |
| rs73845302 | 1.00[EUR][1000 genomes] |
| rs73845816 | 1.00[EUR][1000 genomes] |
| rs73845820 | 1.00[EUR][1000 genomes] |
| rs73848116 | 1.00[EUR][1000 genomes] |
| rs7667465 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv879882 | chr4:125662969-125703938 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:125676400-125678000 | Weak transcription | NHDF-Ad | bronchial |
| 2 | chr4:125676400-125678600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
