The 2.0 version of rSNPBase

Variant report

Variant rs72926072
Chromosome Location chr4:130000964-130000965
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:129983000-130001600 Weak transcription Fetal Heart heart
2 chr4:129985200-130001000 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr4:129985200-130001200 Weak transcription Small Intestine intestine
4 chr4:129985200-130002200 Weak transcription Pancreas Pancrea
5 chr4:129985200-130012200 Weak transcription HSMM muscle
6 chr4:129985200-130013000 Weak transcription Rectal Smooth Muscle rectum
7 chr4:129985200-130013200 Weak transcription Colon Smooth Muscle Colon
8 chr4:129986600-130001000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr4:129987000-130011600 Weak transcription Muscle Satellite Cultured Cells --
10 chr4:129990400-130004000 Weak transcription Right Ventricle heart
11 chr4:129991600-130011800 Weak transcription Hela-S3 cervix
12 chr4:129991800-130012000 Weak transcription HUVEC blood vessel
13 chr4:129992200-130003600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr4:129992200-130005400 Weak transcription Psoas Muscle Psoas
15 chr4:129992400-130001200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr4:129992600-130005800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr4:129992600-130012000 Weak transcription HepG2 liver
18 chr4:129992800-130001000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr4:129993000-130007600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr4:129993000-130012000 Weak transcription Stomach Mucosa stomach
21 chr4:129994600-130001000 Weak transcription K562 blood
22 chr4:129994600-130001400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr4:129995600-130002800 Weak transcription NHDF-Ad bronchial
24 chr4:129995600-130011400 Weak transcription A549 lung
25 chr4:129997200-130012000 Weak transcription NHEK skin
26 chr4:129997600-130002400 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr4:129997600-130010000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr4:129997800-130001000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr4:129998800-130003000 ZNF genes & repeats Primary hematopoietic stem cells blood
30 chr4:129998800-130003000 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr4:129998800-130003000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:129999000-130001000 Strong transcription Dnd41 blood
33 chr4:129999000-130002800 ZNF genes & repeats Brain Germinal Matrix brain
34 chr4:129999000-130002800 ZNF genes & repeats Fetal Brain Female brain
35 chr4:129999000-130003000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
36 chr4:129999000-130003000 Strong transcription Primary T cells from cord blood blood
37 chr4:129999000-130003000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr4:129999000-130003400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr4:129999000-130008200 ZNF genes & repeats GM12878-XiMat blood
40 chr4:129999200-130001600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr4:129999200-130006400 Weak transcription Fetal Kidney kidney
42 chr4:129999200-130012600 Weak transcription NH-A brain
43 chr4:129999400-130005400 Weak transcription Brain Substantia Nigra brain
44 chr4:129999400-130011400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:129999600-130001400 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr4:129999600-130001400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr4:129999800-130003400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr4:130000000-130001000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr4:130000000-130001400 ZNF genes & repeats Fetal Stomach stomach
50 chr4:130000000-130002000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015