The 2.0 version of rSNPBase

Variant report

Variant rs72955402
Chromosome Location chr1:93631472-93631473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93580200-93643600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:93582400-93642800 Weak transcription Gastric stomach
3 chr1:93583600-93635400 Weak transcription Pancreas Pancrea
4 chr1:93585800-93642200 Weak transcription Esophagus oesophagus
5 chr1:93595800-93635600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:93600400-93635400 Weak transcription Spleen Spleen
7 chr1:93601000-93643600 Weak transcription HSMMtube muscle
8 chr1:93601400-93635400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:93606000-93644600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:93606800-93635400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:93611800-93644600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:93614200-93634800 Weak transcription A549 lung
13 chr1:93615600-93643200 Weak transcription Fetal Kidney kidney
14 chr1:93620800-93635600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:93621400-93632000 Weak transcription Fetal Muscle Leg muscle
16 chr1:93621400-93632200 Weak transcription Fetal Stomach stomach
17 chr1:93621400-93635400 Weak transcription Thymus Thymus
18 chr1:93621400-93635600 Weak transcription Lung lung
19 chr1:93621400-93636800 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:93621400-93637800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:93621400-93640000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:93621400-93643000 Weak transcription HMEC breast
23 chr1:93621400-93643800 Weak transcription Colonic Mucosa Colon
24 chr1:93621600-93641400 Weak transcription NHEK skin
25 chr1:93622200-93637200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:93622400-93636400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:93623200-93633200 Weak transcription Hela-S3 cervix
28 chr1:93624000-93637200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:93624000-93643400 Weak transcription NH-A brain
30 chr1:93624000-93643600 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:93624200-93636400 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr1:93624400-93643600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:93624800-93636400 Weak transcription Primary T cells from cord blood blood
34 chr1:93624800-93641600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:93624800-93643600 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr1:93624800-93643600 Weak transcription Placenta Amnion Placenta Amnion
37 chr1:93625000-93636600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:93625000-93640000 Weak transcription K562 blood
39 chr1:93625000-93641200 Weak transcription HSMM muscle
40 chr1:93625200-93635400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:93625200-93637200 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:93625400-93631600 Weak transcription Fetal Muscle Trunk muscle
43 chr1:93625400-93636600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr1:93625600-93634600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr1:93625600-93634800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr1:93625600-93637600 Weak transcription NHLF lung
47 chr1:93625800-93632400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:93625800-93632400 Weak transcription Fetal Intestine Large intestine
49 chr1:93625800-93633200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:93625800-93635600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015