The 2.0 version of rSNPBase

Variant report

Variant rs72959216
Chromosome Location chr1:93707569-93707570
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93647000-93756400 Weak transcription Gastric stomach
2 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:93654200-93708400 Weak transcription Esophagus oesophagus
4 chr1:93654600-93708000 Weak transcription Ovary ovary
5 chr1:93657600-93708400 Weak transcription Left Ventricle heart
6 chr1:93661400-93708200 Weak transcription Fetal Muscle Trunk muscle
7 chr1:93661800-93708200 Weak transcription Fetal Brain Female brain
8 chr1:93665400-93708400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:93665400-93708400 Weak transcription Spleen Spleen
10 chr1:93665600-93707800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:93665800-93707800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:93666600-93727000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:93668800-93708400 Weak transcription Duodenum Mucosa Duodenum
14 chr1:93672600-93708400 Weak transcription Placenta Placenta
15 chr1:93682400-93708800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:93684800-93708400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:93685400-93708400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:93685600-93708400 Weak transcription NH-A brain
19 chr1:93685600-93709200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:93686600-93708400 Weak transcription Aorta Aorta
21 chr1:93686800-93708400 Weak transcription Fetal Lung lung
22 chr1:93688200-93714800 Weak transcription HSMMtube muscle
23 chr1:93689200-93708400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:93690200-93708600 Weak transcription NHLF lung
25 chr1:93690400-93729400 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr1:93691200-93732400 Weak transcription HUVEC blood vessel
27 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:93693400-93709200 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr1:93694200-93707800 Weak transcription Fetal Stomach stomach
30 chr1:93700200-93707600 Strong transcription Primary B cells from cord blood blood
31 chr1:93702200-93707600 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr1:93702400-93708600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:93703200-93708400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:93703400-93708400 Weak transcription Fetal Intestine Large intestine
35 chr1:93703600-93709200 Weak transcription Fetal Heart heart
36 chr1:93704000-93708400 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:93704200-93729800 Weak transcription Hela-S3 cervix
38 chr1:93704400-93708400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:93704800-93707800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:93704800-93708400 Weak transcription HepG2 liver
41 chr1:93704800-93708600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:93704800-93710800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:93705000-93708000 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr1:93705000-93708400 Strong transcription Muscle Satellite Cultured Cells --
45 chr1:93705200-93707800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:93705200-93707800 Strong transcription Primary B cells from peripheral blood blood
47 chr1:93705200-93708000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:93705200-93708000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:93705200-93708400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:93705200-93709000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015