The 2.0 version of rSNPBase

Variant report

Variant rs72968072
Chromosome Location chr1:93342693-93342694
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93304400-93349000 Weak transcription Aorta Aorta
2 chr1:93316000-93342800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:93325000-93342800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:93325000-93343000 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:93325200-93342800 Weak transcription Liver Liver
6 chr1:93325200-93343600 Weak transcription Stomach Smooth Muscle stomach
7 chr1:93325200-93348400 Weak transcription NHEK skin
8 chr1:93325400-93343400 Weak transcription Duodenum Mucosa Duodenum
9 chr1:93325600-93343200 Weak transcription HSMMtube muscle
10 chr1:93333000-93348600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:93333600-93343000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:93335400-93343000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:93335800-93348400 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:93336400-93348800 Weak transcription Left Ventricle heart
15 chr1:93336600-93349200 Weak transcription HepG2 liver
16 chr1:93337000-93348400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:93337800-93345200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:93338400-93343000 Weak transcription Adipose Nuclei Adipose
19 chr1:93338600-93343200 Weak transcription Colon Smooth Muscle Colon
20 chr1:93338800-93347800 Weak transcription HMEC breast
21 chr1:93338800-93348200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:93338800-93348400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:93339000-93343000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:93339000-93345000 Weak transcription A549 lung
25 chr1:93339000-93348200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:93339000-93352600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:93339800-93343000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:93340400-93343000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:93340800-93342800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:93340800-93348800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:93340800-93351600 Weak transcription Small Intestine intestine
32 chr1:93341200-93342800 Weak transcription Primary B cells from peripheral blood blood
33 chr1:93341400-93343200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr1:93341800-93342800 Flanking Active TSS Brain Substantia Nigra brain
35 chr1:93341800-93343000 Weak transcription Fetal Brain Female brain
36 chr1:93341800-93343600 Active TSS Brain Angular Gyrus brain
37 chr1:93341800-93344200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:93341800-93345600 Enhancers Primary T helper cells fromperipheralblood blood
39 chr1:93342000-93342800 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr1:93342000-93342800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:93342000-93343000 Active TSS Brain Inferior Temporal Lobe brain
42 chr1:93342000-93343200 Flanking Active TSS Thymus Thymus
43 chr1:93342000-93343800 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr1:93342000-93344000 Enhancers Cortex derived primary cultured neurospheres brain
45 chr1:93342000-93344000 Enhancers Sigmoid Colon Sigmoid Colon
46 chr1:93342000-93344200 Enhancers Primary T helper naive cells fromperipheralblood blood
47 chr1:93342000-93345800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr1:93342200-93343000 Enhancers Primary T helper cells PMA-I stimulated --
49 chr1:93342200-93343200 Active TSS Brain Cingulate Gyrus brain
50 chr1:93342200-93343400 Enhancers Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015