The 2.0 version of rSNPBase

Variant report

Variant rs72968080
Chromosome Location chr1:93346854-93346855
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93304400-93349000 Weak transcription Aorta Aorta
2 chr1:93325200-93348400 Weak transcription NHEK skin
3 chr1:93333000-93348600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:93335800-93348400 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr1:93336400-93348800 Weak transcription Left Ventricle heart
6 chr1:93336600-93349200 Weak transcription HepG2 liver
7 chr1:93337000-93348400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:93338800-93347800 Weak transcription HMEC breast
9 chr1:93338800-93348200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:93338800-93348400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:93339000-93348200 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr1:93339000-93352600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:93340800-93348800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:93340800-93351600 Weak transcription Small Intestine intestine
15 chr1:93343400-93348400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:93343800-93348000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr1:93343800-93348400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr1:93343800-93348400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr1:93343800-93348400 Weak transcription Osteobl bone
20 chr1:93343800-93348600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:93344000-93348000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:93344000-93348400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:93344000-93348400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:93344000-93348400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:93344200-93348000 Weak transcription Primary B cells from cord blood blood
26 chr1:93344600-93351400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:93345200-93348400 Weak transcription GM12878-XiMat blood
28 chr1:93345600-93348000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:93345600-93348200 Weak transcription Primary B cells from peripheral blood blood
30 chr1:93345600-93348200 Weak transcription Fetal Thymus thymus
31 chr1:93345600-93348600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:93345600-93350000 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr1:93345800-93347000 Weak transcription Primary T cells from cord blood blood
34 chr1:93345800-93347000 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:93345800-93347200 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:93345800-93347200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:93345800-93347800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:93345800-93348000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr1:93345800-93348000 Weak transcription Thymus Thymus
40 chr1:93345800-93348400 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:93345800-93348400 Weak transcription Brain Anterior Caudate brain
42 chr1:93345800-93348400 Weak transcription Brain Cingulate Gyrus brain
43 chr1:93345800-93348400 Weak transcription Brain Substantia Nigra brain
44 chr1:93346200-93348000 Weak transcription Dnd41 blood
45 chr1:93346400-93348000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:93346800-93347200 Enhancers Brain Inferior Temporal Lobe brain
47 chr1:93346800-93347400 Enhancers Primary T helper cells PMA-I stimulated --
48 chr1:93346800-93347400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:93346800-93347400 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015