The 2.0 version of rSNPBase

Variant report

Variant rs72968088
Chromosome Location chr1:93348823-93348824
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93304400-93349000 Weak transcription Aorta Aorta
2 chr1:93336600-93349200 Weak transcription HepG2 liver
3 chr1:93339000-93352600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr1:93340800-93351600 Weak transcription Small Intestine intestine
5 chr1:93344600-93351400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:93345600-93350000 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr1:93347000-93350000 Enhancers Primary T cells fromperipheralblood blood
8 chr1:93347800-93350200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr1:93347800-93350400 Enhancers Primary T helper naive cells from peripheral blood blood
10 chr1:93347800-93351000 Enhancers Primary T helper naive cells fromperipheralblood blood
11 chr1:93348000-93349600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:93348000-93349800 Enhancers Primary B cells from cord blood blood
13 chr1:93348000-93349800 Enhancers Primary T killer memory cells from peripheral blood blood
14 chr1:93348000-93350000 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr1:93348000-93350000 Enhancers Thymus Thymus
16 chr1:93348000-93350800 Enhancers Primary T helper cells fromperipheralblood blood
17 chr1:93348000-93351000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr1:93348200-93349000 Flanking Active TSS Primary T cells from cord blood blood
19 chr1:93348200-93349200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:93348200-93349400 Enhancers Primary monocytes fromperipheralblood blood
21 chr1:93348200-93349400 Flanking Active TSS Dnd41 blood
22 chr1:93348200-93349400 Enhancers Monocytes-CD14+_RO01746 blood
23 chr1:93348200-93349600 Enhancers Fetal Thymus thymus
24 chr1:93348200-93349800 Enhancers Primary B cells from peripheral blood blood
25 chr1:93348400-93349000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:93348400-93349000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:93348400-93349200 Enhancers Primary neutrophils fromperipheralblood blood
28 chr1:93348400-93349200 Enhancers Brain Substantia Nigra brain
29 chr1:93348400-93349200 Enhancers GM12878-XiMat blood
30 chr1:93348400-93349200 Enhancers NHEK skin
31 chr1:93348400-93349400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:93348400-93349400 Enhancers Brain Anterior Caudate brain
33 chr1:93348400-93349600 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr1:93348400-93349600 Enhancers Sigmoid Colon Sigmoid Colon
35 chr1:93348400-93350800 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr1:93348400-93350800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:93348600-93349000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:93348600-93349200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:93348600-93349200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr1:93348600-93349600 Enhancers Brain Hippocampus Middle brain
41 chr1:93348800-93349000 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr1:93348800-93350800 Enhancers Primary T helper cells PMA-I stimulated --
43 chr1:93348800-93352400 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015