The 2.0 version of rSNPBase

Variant report

Variant rs72969374
Chromosome Location chr1:94356929-94356930
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94345000-94357000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:94345000-94374200 Weak transcription Gastric stomach
3 chr1:94345000-94374200 Weak transcription Spleen Spleen
4 chr1:94345200-94358800 Weak transcription Left Ventricle heart
5 chr1:94345200-94374000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:94345200-94374200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:94345400-94357000 Weak transcription Fetal Muscle Trunk muscle
8 chr1:94345400-94357200 Weak transcription NHLF lung
9 chr1:94345400-94358800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:94345400-94359200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:94345400-94361000 Weak transcription Fetal Thymus thymus
12 chr1:94345400-94362000 Weak transcription Fetal Muscle Leg muscle
13 chr1:94345400-94364000 Weak transcription Fetal Intestine Small intestine
14 chr1:94345400-94369400 Weak transcription Colonic Mucosa Colon
15 chr1:94345400-94373200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:94345400-94373200 Weak transcription Brain Substantia Nigra brain
17 chr1:94345400-94373800 Weak transcription Fetal Stomach stomach
18 chr1:94345400-94374000 Weak transcription Right Ventricle heart
19 chr1:94345600-94357600 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr1:94345600-94357800 Weak transcription Hela-S3 cervix
21 chr1:94345600-94358400 Weak transcription Primary B cells from peripheral blood blood
22 chr1:94345600-94358400 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:94345600-94358600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:94345600-94358600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:94345600-94358600 Weak transcription Fetal Intestine Large intestine
26 chr1:94345600-94358600 Weak transcription NHEK skin
27 chr1:94345600-94358800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:94345600-94359400 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr1:94345600-94359400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:94345600-94359400 Weak transcription GM12878-XiMat blood
31 chr1:94345600-94359600 Weak transcription Primary B cells from cord blood blood
32 chr1:94345600-94359600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr1:94345600-94361000 Weak transcription Brain Angular Gyrus brain
34 chr1:94345600-94361000 Weak transcription Brain Anterior Caudate brain
35 chr1:94345600-94361800 Weak transcription Stomach Smooth Muscle stomach
36 chr1:94345600-94362000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:94345600-94362000 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:94345600-94362000 Weak transcription Brain Hippocampus Middle brain
39 chr1:94345600-94369400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr1:94345600-94369400 Weak transcription Fetal Lung lung
41 chr1:94345600-94369800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:94345600-94371600 Weak transcription Fetal Kidney kidney
43 chr1:94345600-94373000 Weak transcription Fetal Brain Female brain
44 chr1:94345600-94373200 Weak transcription Brain Cingulate Gyrus brain
45 chr1:94345600-94373200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:94345600-94373200 Weak transcription Fetal Brain Male brain
47 chr1:94345600-94373400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:94345600-94373400 Weak transcription Psoas Muscle Psoas
49 chr1:94345600-94373400 Weak transcription Stomach Mucosa stomach
50 chr1:94345600-94373600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015