The 2.0 version of rSNPBase

Variant report

Variant rs7297398
Chromosome Location chr12:51588844-51588845
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51567400-51610600 Weak transcription Right Atrium heart
2 chr12:51578200-51596800 Weak transcription Fetal Lung lung
3 chr12:51580400-51592000 Weak transcription Gastric stomach
4 chr12:51580600-51595800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr12:51580800-51596800 Weak transcription Primary T cells from cord blood blood
6 chr12:51581000-51593200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr12:51581400-51600400 Weak transcription Psoas Muscle Psoas
8 chr12:51581400-51610200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr12:51581800-51592000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr12:51581800-51596600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr12:51581800-51610600 Weak transcription Colonic Mucosa Colon
12 chr12:51582000-51592600 Weak transcription Fetal Intestine Large intestine
13 chr12:51582000-51597000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr12:51582200-51593000 Strong transcription Brain Hippocampus Middle brain
15 chr12:51582200-51594000 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr12:51582200-51608000 Weak transcription NHLF lung
17 chr12:51582400-51593000 Weak transcription Duodenum Mucosa Duodenum
18 chr12:51582400-51594800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr12:51582400-51600000 Weak transcription H9 Cell Line embryonic stem cell
20 chr12:51582400-51600600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr12:51582600-51590600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr12:51583400-51594200 Strong transcription Fetal Stomach stomach
23 chr12:51583400-51602400 Weak transcription Fetal Brain Male brain
24 chr12:51583600-51591800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr12:51583600-51598400 Weak transcription Osteobl bone
26 chr12:51584000-51589400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr12:51584000-51597000 Weak transcription Left Ventricle heart
28 chr12:51584200-51591400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr12:51584200-51591600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr12:51584400-51610800 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr12:51584600-51594600 Strong transcription Fetal Muscle Leg muscle
32 chr12:51584600-51596600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr12:51585000-51610200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr12:51585000-51610800 Weak transcription Placenta Amnion Placenta Amnion
35 chr12:51585400-51591200 Weak transcription Pancreas Pancrea
36 chr12:51585400-51592400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr12:51585400-51610200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr12:51585600-51590200 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr12:51585800-51596600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr12:51585800-51596800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr12:51585800-51601400 Weak transcription Rectal Smooth Muscle rectum
42 chr12:51585800-51610400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr12:51586000-51591400 Weak transcription Primary T cells fromperipheralblood blood
44 chr12:51586000-51591400 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr12:51586000-51610200 Weak transcription Primary B cells from peripheral blood blood
46 chr12:51586200-51589200 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr12:51586200-51589800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr12:51586200-51590000 Weak transcription Lung lung
49 chr12:51586200-51591200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr12:51586200-51591200 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015