Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:164194495..164199881-chr6:164208039..164212902,6	K562	blood:
2	chr6:164197559..164200585-chr6:164208850..164211951,4	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs13194833	0.82[ASN][1000 genomes]
rs1475208	0.82[ASN][1000 genomes]
rs16895346	0.82[ASN][1000 genomes]
rs16895356	0.82[ASN][1000 genomes]
rs34811073	0.82[ASN][1000 genomes]
rs35390637	0.82[ASN][1000 genomes]
rs4709018	0.82[ASN][1000 genomes]
rs4709759	0.82[ASN][1000 genomes]
rs55660553	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56156318	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56285193	0.88[ASN][1000 genomes]
rs60028618	0.82[ASN][1000 genomes]
rs6455920	0.86[ASN][1000 genomes]
rs6911532	0.80[ASN][1000 genomes]
rs6911882	0.80[ASN][1000 genomes]
rs6922730	0.82[ASN][1000 genomes]
rs6929903	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73019149	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7741725	0.82[ASN][1000 genomes]
rs7742572	0.82[ASN][1000 genomes]
rs7756548	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7765450	0.82[ASN][1000 genomes]
rs9365609	0.82[ASN][1000 genomes]
rs9365610	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018860	chr6:163939347-164532579	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv538526	chr6:163939347-164532579	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	nsv1026707	chr6:164188210-164749206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv538527	chr6:164188210-164749206	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:164204000-164210400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:164204000-164210600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr6:164204400-164210200	Weak transcription	GM12878-XiMat	blood
4	chr6:164208200-164210600	Enhancers	K562	blood
5	chr6:164208400-164211400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:164209200-164209600	Enhancers	Fetal Muscle Trunk	muscle
7	chr6:164209200-164210800	Enhancers	Psoas Muscle	Psoas
8	chr6:164209200-164211600	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr6:164209200-164212000	Enhancers	Fetal Muscle Leg	muscle
10	chr6:164209400-164211600	Enhancers	Skeletal Muscle Female	skeletal muscle

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