Variant report

Variant	rs73050276
Chromosome Location	chr3:23216732-23216733
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10510537	1.00[AMR][1000 genomes]
rs13077333	0.81[ASN][1000 genomes]
rs13083654	0.85[ASN][1000 genomes]
rs13087234	0.82[ASN][1000 genomes]
rs1495132	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17012823	0.96[AMR][1000 genomes]
rs17012834	1.00[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs17012844	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs17012852	1.00[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs17012861	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17012897	0.82[ASN][1000 genomes]
rs17012927	1.00[AMR][1000 genomes]
rs17012943	1.00[AMR][1000 genomes]
rs17012959	1.00[AMR][1000 genomes]
rs17012969	1.00[AMR][1000 genomes]
rs17012988	1.00[AMR][1000 genomes]
rs17012998	1.00[AMR][1000 genomes]
rs17013023	1.00[AMR][1000 genomes]
rs17013026	1.00[AMR][1000 genomes]
rs17013029	1.00[AMR][1000 genomes]
rs17013035	1.00[AMR][1000 genomes]
rs17013049	0.96[AMR][1000 genomes]
rs17013104	1.00[AMR][1000 genomes]
rs17013116	0.95[AMR][1000 genomes]
rs17013125	1.00[AMR][1000 genomes]
rs17013128	1.00[AMR][1000 genomes]
rs2014132	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2291720	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34239585	0.85[ASN][1000 genomes]
rs34259979	0.85[ASN][1000 genomes]
rs35743404	0.85[ASN][1000 genomes]
rs36004369	0.86[ASN][1000 genomes]
rs58844120	1.00[AMR][1000 genomes]
rs59365170	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs60709653	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73044305	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73044309	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73044318	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73044329	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73044337	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73044339	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73050236	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73050238	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73050257	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73050270	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9809194	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999882	chr3:23121533-23257718	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv834636	chr3:23138653-23301443	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23216000-23217800	Enhancers	HUVEC	blood vessel

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