Variant report

Variant	rs73065150
Chromosome Location	chr1:195802994-195802995
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:195689328..195691093-chr1:195801582..195803089,2	K562	blood:
2	chr1:195797258..195800617-chr1:195801133..195805279,5	K562	blood:
3	chr1:195801949..195804625-chr1:195806180..195808826,3	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12061613	1.00[EUR][1000 genomes]
rs16838961	1.00[EUR][1000 genomes]
rs56742030	1.00[EUR][1000 genomes]
rs57057259	1.00[EUR][1000 genomes]
rs58467507	1.00[EUR][1000 genomes]
rs59718710	1.00[EUR][1000 genomes]
rs6658165	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6676482	1.00[EUR][1000 genomes]
rs6690674	1.00[EUR][1000 genomes]
rs73056343	1.00[EUR][1000 genomes]
rs73056346	1.00[EUR][1000 genomes]
rs73056348	1.00[EUR][1000 genomes]
rs73056357	1.00[EUR][1000 genomes]
rs73060547	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73060549	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73060550	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73060553	1.00[EUR][1000 genomes]
rs73060560	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73060569	1.00[EUR][1000 genomes]
rs73060572	1.00[EUR][1000 genomes]
rs73071004	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73071007	1.00[EUR][1000 genomes]
rs73071048	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73071050	1.00[EUR][1000 genomes]
rs73071052	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73071054	1.00[EUR][1000 genomes]
rs73071058	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872937	chr1:195493538-195849028	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv1007203	chr1:195672857-195902360	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv872941	chr1:195770204-195820337	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv1014402	chr1:195792089-195877256	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1815602	chr1:195796224-195830040	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2762212	chr1:195797081-195820890	Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3338730	chr1:195800729-195803327	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3398468	chr1:195801129-195803077	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:195801200-195804200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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