Variant report

Variant	rs73093524
Chromosome Location	chr1:220737025-220737026
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs57961020	1.00[AFR][1000 genomes]
rs58885712	1.00[AFR][1000 genomes]
rs60323434	1.00[AFR][1000 genomes]
rs73093505	1.00[AFR][1000 genomes]
rs73093515	1.00[AFR][1000 genomes]
rs73093539	1.00[AFR][1000 genomes]
rs73105429	1.00[AFR][1000 genomes]
rs73105437	1.00[AFR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220718000-220738600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr1:220718600-220738600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr1:220718600-220739000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr1:220722600-220738800	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr1:220723200-220738600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:220724400-220743400	Weak transcription	Fetal Brain Male	brain
7	chr1:220724600-220737600	Weak transcription	Fetal Brain Female	brain
8	chr1:220724600-220741600	Weak transcription	Aorta	Aorta
9	chr1:220724800-220738800	Weak transcription	Right Atrium	heart
10	chr1:220727400-220738800	Weak transcription	Fetal Muscle Trunk	muscle
11	chr1:220727800-220738800	Weak transcription	Fetal Heart	heart
12	chr1:220728000-220745200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr1:220728600-220739000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr1:220729800-220739000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr1:220730400-220747400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr1:220734200-220738800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr1:220735400-220739800	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr1:220736400-220737400	Enhancers	Brain Germinal Matrix	brain
19	chr1:220736400-220737400	Weak transcription	Colon Smooth Muscle	Colon
20	chr1:220736800-220737400	Enhancers	Pancreatic Islets	Pancreatic Islet
21	chr1:220736800-220737800	Enhancers	Adipose Nuclei	Adipose
22	chr1:220737000-220737600	Enhancers	Rectal Smooth Muscle	rectum
23	chr1:220737000-220737800	Enhancers	Duodenum Smooth Muscle	Duodenum
24	chr1:220737000-220738200	Enhancers	Brain Anterior Caudate	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links