Variant report

Variant	rs73094123
Chromosome Location	chr1:215596839-215596840
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs60973422	0.90[AFR][1000 genomes]
rs61388332	0.90[AFR][1000 genomes]
rs61600848	1.00[AFR][1000 genomes]
rs6540898	0.90[AFR][1000 genomes]
rs73092000	1.00[AFR][1000 genomes]
rs73094106	1.00[AFR][1000 genomes]
rs73094111	1.00[AFR][1000 genomes]
rs73094115	1.00[AFR][1000 genomes]
rs73098198	0.90[AFR][1000 genomes]
rs73098201	0.90[AFR][1000 genomes]
rs73100121	0.90[AFR][1000 genomes]
rs7536789	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832537	chr1:215509026-215705105	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv1796390	chr1:215561548-215799074	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
3	nsv1014266	chr1:215573051-215730838	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215594400-215597000	Enhancers	Muscle Satellite Cultured Cells	--
2	chr1:215596000-215597400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr1:215596000-215597800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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