Variant report

Variant	rs73129838
Chromosome Location	chr1:225072210-225072211
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10915712	1.00[EUR][1000 genomes]
rs10915713	1.00[EUR][1000 genomes]
rs58883363	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59263273	1.00[EUR][1000 genomes]
rs59279645	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59777302	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59930091	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60002937	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60489231	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60846144	1.00[EUR][1000 genomes]
rs61564365	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61732752	0.81[AFR][1000 genomes]
rs61745064	1.00[EUR][1000 genomes]
rs6702972	1.00[EUR][1000 genomes]
rs73127901	1.00[EUR][1000 genomes]
rs73129810	1.00[EUR][1000 genomes]
rs73129812	1.00[EUR][1000 genomes]
rs73129837	1.00[EUR][1000 genomes]
rs73129850	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73129853	1.00[EUR][1000 genomes]
rs73129855	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73129861	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73129867	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73129870	1.00[EUR][1000 genomes]
rs73129894	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73129898	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73129900	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73131704	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73133542	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73133544	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73133554	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73133577	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74146264	1.00[EUR][1000 genomes]
rs7415021	0.81[AFR][1000 genomes]
rs7522229	1.00[EUR][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225067000-225073000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr1:225069000-225072400	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr1:225069600-225073400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:225069600-225073400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr1:225069800-225072600	Weak transcription	A549	lung
6	chr1:225070200-225072800	Enhancers	Fetal Lung	lung
7	chr1:225070800-225072800	Enhancers	Fetal Intestine Large	intestine
8	chr1:225071000-225072800	Enhancers	Fetal Intestine Small	intestine
9	chr1:225071000-225072800	Enhancers	Fetal Kidney	kidney
10	chr1:225071200-225072600	Enhancers	Colon Smooth Muscle	Colon
11	chr1:225071200-225072800	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr1:225071400-225072800	Enhancers	Rectal Mucosa Donor 29	rectum
13	chr1:225071600-225072600	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr1:225071600-225072600	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr1:225071600-225072600	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr1:225071600-225072800	Enhancers	H9 Cell Line	embryonic stem cell
17	chr1:225071600-225072800	Enhancers	Liver	Liver
18	chr1:225071600-225072800	Enhancers	Ovary	ovary
19	chr1:225071800-225072400	Enhancers	Rectal Smooth Muscle	rectum
20	chr1:225071800-225072600	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr1:225071800-225073000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr1:225072000-225072400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr1:225072000-225072400	Enhancers	Fetal Stomach	stomach
24	chr1:225072000-225072800	Enhancers	Fetal Brain Male	brain
25	chr1:225072200-225072400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr1:225072200-225072400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr1:225072200-225072400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr1:225072200-225072600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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