Variant report

Variant	rs73133207
Chromosome Location	chr5:92736644-92736645
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10044190	1.00[ASN][1000 genomes]
rs10053101	1.00[ASN][1000 genomes]
rs10079491	1.00[ASN][1000 genomes]
rs10476518	1.00[ASN][1000 genomes]
rs1157899	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11956893	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13355597	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13360184	1.00[ASN][1000 genomes]
rs1460748	1.00[ASN][1000 genomes]
rs6875613	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6875617	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6891846	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73131381	1.00[ASN][1000 genomes]
rs73131385	1.00[ASN][1000 genomes]
rs73131390	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73131401	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73133209	1.00[ASN][1000 genomes]
rs9314083	1.00[ASN][1000 genomes]
rs9314084	1.00[ASN][1000 genomes]
rs9688292	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830400	chr5:92515026-92738896	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv830402	chr5:92703901-92847345	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92732400-92738600	Weak transcription	Fetal Kidney	kidney
2	chr5:92732400-92739600	Weak transcription	Fetal Lung	lung
3	chr5:92733800-92741000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr5:92735800-92737200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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