The 2.0 version of rSNPBase

Variant report

Variant rs7314080
Chromosome Location chr12:11653999-11654000
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11652200-11655000 Active TSS Brain Angular Gyrus brain
2 chr12:11652600-11655200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
3 chr12:11652800-11654000 Bivalent Enhancer Primary T cells fromperipheralblood blood
4 chr12:11652800-11654000 Enhancers Fetal Brain Male brain
5 chr12:11652800-11654000 Enhancers Gastric stomach
6 chr12:11652800-11654000 Enhancers Pancreas Pancrea
7 chr12:11652800-11654000 Enhancers Right Ventricle heart
8 chr12:11652800-11654200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr12:11652800-11654200 Bivalent/Poised TSS Fetal Brain Female brain
10 chr12:11653000-11654000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
11 chr12:11653000-11654000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
12 chr12:11653000-11654000 Enhancers Primary T helper cells fromperipheralblood blood
13 chr12:11653000-11654000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
14 chr12:11653000-11654000 Bivalent Enhancer Fetal Muscle Trunk muscle
15 chr12:11653000-11654000 Bivalent Enhancer Fetal Thymus thymus
16 chr12:11653200-11654000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr12:11653200-11654000 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr12:11653200-11654000 Enhancers Adipose Nuclei Adipose
19 chr12:11653200-11654000 Bivalent Enhancer Fetal Muscle Leg muscle
20 chr12:11653200-11654000 Enhancers Ovary ovary
21 chr12:11653200-11654000 Bivalent Enhancer Thymus Thymus
22 chr12:11653200-11654000 ZNF genes & repeats Spleen Spleen
23 chr12:11653200-11656600 Active TSS Brain Inferior Temporal Lobe brain
24 chr12:11653400-11654000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr12:11653400-11654000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
26 chr12:11653400-11654200 Bivalent/Poised TSS Brain Germinal Matrix brain
27 chr12:11653400-11654600 Active TSS Brain Hippocampus Middle brain
28 chr12:11653400-11655200 Active TSS Brain Anterior Caudate brain
29 chr12:11653600-11654000 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
30 chr12:11653600-11654000 Enhancers H1 Cell Line embryonic stem cell
31 chr12:11653600-11654000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
32 chr12:11653600-11654000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
33 chr12:11653600-11654000 Enhancers Cortex derived primary cultured neurospheres brain
34 chr12:11653600-11654200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr12:11653600-11654800 Active TSS Brain Cingulate Gyrus brain
36 chr12:11653800-11654000 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
37 chr12:11653800-11654000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr12:11653800-11654000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
39 chr12:11653800-11654000 Bivalent Enhancer Stomach Mucosa stomach

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Last update: Aug 31, 2015