Variant report

Variant	rs73145969
Chromosome Location	chr3:23113512-23113513
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs58744973	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61686844	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6794571	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6804016	0.83[AMR][1000 genomes]
rs73145951	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73145952	0.85[AMR][1000 genomes]
rs9845196	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9849300	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9859420	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9870020	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9875332	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23105000-23121400	Weak transcription	Psoas Muscle	Psoas
2	chr3:23108400-23115600	Weak transcription	Fetal Lung	lung
3	chr3:23108800-23115800	Enhancers	Primary B cells from peripheral blood	blood
4	chr3:23110400-23119200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr3:23110400-23119400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr3:23111000-23119000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr3:23111400-23114200	Enhancers	Fetal Thymus	thymus
8	chr3:23111400-23114400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr3:23111600-23115400	Enhancers	Primary hematopoietic stem cells	blood
10	chr3:23112000-23114200	Enhancers	Dnd41	blood
11	chr3:23112000-23115000	Enhancers	Primary B cells from cord blood	blood
12	chr3:23112200-23113600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr3:23112200-23115400	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr3:23112400-23114400	Enhancers	Fetal Muscle Leg	muscle
15	chr3:23112600-23114200	Enhancers	HSMMtube	muscle
16	chr3:23112600-23114600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
17	chr3:23112800-23116400	Weak transcription	Adipose Nuclei	Adipose
18	chr3:23113000-23113600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr3:23113000-23114000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr3:23113000-23114200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
21	chr3:23113200-23113600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr3:23113200-23113600	Flanking Active TSS	GM12878-XiMat	blood
23	chr3:23113200-23113800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr3:23113200-23115600	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr3:23113400-23113800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell

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