Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:137769402..137771015-chr7:137771922..137774982,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10236161	0.88[ASN][1000 genomes]
rs12670239	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1601823	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17169507	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17543126	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2306846	0.88[ASN][1000 genomes]
rs3735023	0.83[ASN][1000 genomes]
rs3805362	0.91[ASN][1000 genomes]
rs3857869	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3902226	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55970557	0.94[EUR][1000 genomes]
rs58783780	0.83[ASN][1000 genomes]
rs73155730	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73155740	0.92[ASN][1000 genomes]
rs73155744	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73155745	0.92[ASN][1000 genomes]
rs73155746	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7783021	0.92[ASN][1000 genomes]
rs7797080	0.92[ASN][1000 genomes]
rs7812287	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518070	chr7:137534627-137808839	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv831151	chr7:137711447-137865471	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
3	esv34048	chr7:137724092-138213119	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
4	nsv437032	chr7:137753091-137773291	Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137770400-137772400	Enhancers	HepG2	liver
2	chr7:137772200-137773200	Enhancers	Liver	Liver

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