Variant report

Variant	rs73187816
Chromosome Location	chr7:101775853-101775854
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10243429	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10259857	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10271376	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10271680	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10277680	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11975153	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12538286	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12538988	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12539846	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1734886	0.87[ASN][1000 genomes]
rs17496657	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17498402	0.80[EUR][1000 genomes]
rs2268030	0.81[EUR][1000 genomes]
rs28401723	1.00[ASN][1000 genomes]
rs28603325	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55851631	0.80[ASN][1000 genomes]
rs59220714	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6465850	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67245174	0.86[ASN][1000 genomes]
rs6959475	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73187803	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73187849	0.80[EUR][1000 genomes]
rs73187850	0.80[EUR][1000 genomes]
rs7776498	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7798358	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7807344	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9655774	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101755200-101787000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:101760200-101796000	Weak transcription	Rectal Smooth Muscle	rectum
3	chr7:101760400-101788600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr7:101760400-101789400	Weak transcription	Right Ventricle	heart
5	chr7:101760400-101795800	Weak transcription	Left Ventricle	heart
6	chr7:101761000-101795600	Weak transcription	Colon Smooth Muscle	Colon
7	chr7:101763600-101790400	Weak transcription	Brain Anterior Caudate	brain
8	chr7:101765200-101788600	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr7:101765200-101801200	Weak transcription	Pancreas	Pancrea
10	chr7:101765400-101777200	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr7:101765400-101780000	Weak transcription	Small Intestine	intestine
12	chr7:101765600-101783200	Weak transcription	Primary T helper cells fromperipheralblood	blood
13	chr7:101765600-101801000	Weak transcription	Rectal Mucosa Donor 29	rectum
14	chr7:101765800-101783800	Weak transcription	Primary B cells from peripheral blood	blood
15	chr7:101766000-101777000	Weak transcription	Fetal Lung	lung
16	chr7:101766000-101784600	Weak transcription	HUVEC	blood vessel
17	chr7:101766000-101796000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr7:101766000-101796000	Weak transcription	Duodenum Smooth Muscle	Duodenum
19	chr7:101766000-101796000	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr7:101766200-101777200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr7:101766200-101777200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr7:101766200-101777600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr7:101766200-101779400	Weak transcription	Colonic Mucosa	Colon
24	chr7:101766200-101781000	Weak transcription	Primary hematopoietic stem cells	blood
25	chr7:101766200-101793800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr7:101766200-101796000	Weak transcription	Esophagus	oesophagus
27	chr7:101766200-101796600	Weak transcription	Brain Germinal Matrix	brain
28	chr7:101766400-101777000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr7:101768000-101777600	Weak transcription	Primary B cells from cord blood	blood
30	chr7:101768000-101793800	Weak transcription	K562	blood
31	chr7:101768800-101784600	Weak transcription	Adipose Nuclei	Adipose
32	chr7:101768800-101790200	Weak transcription	Spleen	Spleen
33	chr7:101768800-101793800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr7:101768800-101795200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr7:101769000-101777200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr7:101769000-101777200	Weak transcription	Muscle Satellite Cultured Cells	--
37	chr7:101769000-101777200	Weak transcription	NHLF	lung
38	chr7:101769000-101777200	Weak transcription	Osteobl	bone
39	chr7:101769000-101777400	Weak transcription	NH-A	brain
40	chr7:101769000-101780600	Weak transcription	Lung	lung
41	chr7:101769000-101781800	Weak transcription	HSMMtube	muscle
42	chr7:101769000-101784000	Weak transcription	GM12878-XiMat	blood
43	chr7:101769000-101789600	Weak transcription	HSMM	muscle
44	chr7:101769000-101790000	Weak transcription	Ovary	ovary
45	chr7:101769000-101792400	Weak transcription	Gastric	stomach
46	chr7:101769000-101795000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
47	chr7:101769000-101795400	Weak transcription	HUES6 Cell Line	embryonic stem cell
48	chr7:101769000-101795800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr7:101769000-101795800	Weak transcription	Stomach Smooth Muscle	stomach
50	chr7:101770000-101777200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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