Variant report
| Variant | rs73190184 |
|---|---|
| Chromosome Location | chr7:105163736-105163737 |
| allele | C/T |
| Outlinks | Ensembl   UCSC |
- TF binding region (count:1)
- CpG islands (count:61)
- Chromatin interactive region (count:9)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:1 , 50 per page) page:
1
| No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:105163736-105163786 | CMK | blood: | n/a |
| 2 | chr7:105163736-105163786 | SK-N-MC | brain: | n/a |
| 3 | chr7:105163736-105163786 | HUVEC | blood vessel: | n/a |
| 4 | chr7:105163736-105163786 | ProgFib | skin: | n/a |
| 5 | chr7:105163736-105163786 | HEEpiC | esophagus: | n/a |
| 6 | chr7:105163736-105163786 | HMEC | breast: | n/a |
| 7 | chr7:105163736-105163786 | Hela-S3 | cervix: | n/a |
| 8 | chr7:105163736-105163786 | NT2-D1 | testis: | n/a |
| 9 | chr7:105163736-105163786 | T-47D | breast: | n/a |
| 10 | chr7:105163736-105163786 | Hepatocyte | liver: | n/a |
| 11 | chr7:105163736-105163786 | MCF-7 | breast: | n/a |
| 12 | chr7:105163736-105163786 | K562 | blood: | n/a |
| 13 | chr7:105163736-105163786 | GM06990 | blood: | n/a |
| 14 | chr7:105163736-105163786 | HRCEpiC | kidney: | n/a |
| 15 | chr7:105163736-105163786 | Caco-2 | colon: | n/a |
| 16 | chr7:105163736-105163786 | GM12892 | blood: | n/a |
| 17 | chr7:105163736-105163786 | HRPEpiC | eye: | n/a |
| 18 | chr7:105163736-105163786 | ECC-1 | luminal epithelium: | n/a |
| 19 | chr7:105163736-105163786 | NHBE | bronchial: | n/a |
| 20 | chr7:105163736-105163786 | HL-60 | blood: | n/a |
| 21 | chr7:105163736-105163786 | HIPEpiC | eye: | n/a |
| 22 | chr7:105163736-105163786 | NH-A | brain: | n/a |
| 23 | chr7:105163736-105163786 | NHDF-neo | bronchial: | n/a |
| 24 | chr7:105163736-105163786 | HRE | kidney: | n/a |
| 25 | chr7:105163736-105163786 | PrEC | prostate: | n/a |
| 26 | chr7:105163736-105163786 | LNCaP | prostate: | n/a |
| 27 | chr7:105163736-105163786 | HCT-116 | colon: | n/a |
| 28 | chr7:105163736-105163786 | PFSK-1 | brain: | n/a |
| 29 | chr7:105163736-105163786 | GM19239 | blood: | n/a |
| 30 | chr7:105163736-105163786 | NB4 | blood: | n/a |
| 31 | chr7:105163736-105163786 | HEK293 | kidney: | embryo |
| 32 | chr7:105163736-105163786 | GM12891 | blood: | n/a |
| 33 | chr7:105163736-105163786 | SK-N-SH_RA | brain: | n/a |
| 34 | chr7:105163736-105163786 | H1-hESC | embryonic stem cell: | embryo |
| 35 | chr7:105163736-105163786 | HPAEpiC | pulmonary alveolar: | n/a |
| 36 | chr7:105163736-105163786 | U87 | brain: | n/a |
| 37 | chr7:105163736-105163786 | Jurkat | blood: | n/a |
| 38 | chr7:105163736-105163786 | MCF10A-Er-Src | breast: | n/a |
| 39 | chr7:105163736-105163786 | RPTEC | kidney: | n/a |
| 40 | chr7:105163736-105163786 | HepG2 | liver: | n/a |
| 41 | chr7:105163736-105163786 | AG09309 | skin: | n/a |
| 42 | chr7:105163736-105163786 | AG10803 | skin: | n/a |
| 43 | chr7:105163736-105163786 | HCPEpiC | choroid plexus: | n/a |
| 44 | chr7:105163736-105163786 | HCF | heart: | n/a |
| 45 | chr7:105163736-105163786 | AoSMC | blood vessel: | n/a |
| 46 | chr7:105163736-105163786 | IMR90 | lung: | fetal |
| 47 | chr7:105163736-105163786 | A549 | lung: | n/a |
| 48 | chr7:105163736-105163786 | BJ | skin: | n/a |
| 49 | chr7:105163736-105163786 | HNPCEpiC | eye: | n/a |
| 50 | chr7:105163736-105163786 | GM12878 | blood: | n/a |
(count:9 , 50 per page) page:
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| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:104653151..104655503-chr7:105160083..105164345,7 | K562 | blood: | |
| 2 | chr7:105160261..105165362-chr7:105168599..105174293,22 | MCF-7 | breast: | |
| 3 | chr7:105158727..105165017-chr7:105166972..105176993,56 | K562 | blood: | |
| 4 | chr7:105159598..105163989-chr7:105219696..105223115,7 | MCF-7 | breast: | |
| 5 | chr7:104652163..104655972-chr7:105160292..105163807,4 | MCF-7 | breast: | |
| 6 | chr7:105160687..105164718-chr7:105170642..105174239,14 | MCF-7 | breast: | |
| 7 | chr7:104653054..104655993-chr7:105161169..105164095,3 | MCF-7 | breast: | |
| 8 | chr7:104653151..104655346-chr7:105160083..105164134,5 | K562 | blood: | |
| 9 | chr7:105026529..105029377-chr7:105162488..105165118,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| PUS7 | TF binding region |
| PUS7 | CpG island |
| ENSG00000228393 | Chromatin interaction |
| ENSG00000185055 | Chromatin interaction |
| ENSG00000239569 | Chromatin interaction |
| ENSG00000223886 | Chromatin interaction |
| ENSG00000135250 | Chromatin interaction |
| ENSG00000135249 | Chromatin interaction |
| ENSG00000005483 | Chromatin interaction |
| rs_ID | r2[population] |
|---|---|
| rs11556986 | 0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1355614 | 0.94[EUR][1000 genomes] |
| rs1569134 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1706908 | 0.94[EUR][1000 genomes] |
| rs1721498 | 0.91[EUR][1000 genomes] |
| rs1721500 | 0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17343556 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1976969 | 0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs2392749 | 0.92[EUR][1000 genomes] |
| rs3892297 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs3892298 | 1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4074939 | 0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4083246 | 0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55691539 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55700120 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55701318 | 1.00[ASN][1000 genomes] |
| rs55740553 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55794529 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55825845 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs55906043 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55922564 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55967123 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs55983796 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56055535 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56144672 | 0.83[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56165465 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56177071 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56230603 | 0.94[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs56239334 | 0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs56251768 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56268110 | 0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs56379434 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs57492756 | 1.00[ASN][1000 genomes] |
| rs58194204 | 1.00[ASN][1000 genomes] |
| rs68153235 | 0.92[EUR][1000 genomes] |
| rs6943132 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6944787 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6953851 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6955796 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6956234 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6956249 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6957192 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6957424 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6961233 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6961863 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6969426 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6973263 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6973974 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6977748 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs711430 | 0.94[EUR][1000 genomes] |
| rs711431 | 0.90[EUR][1000 genomes] |
| rs73190133 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190149 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190151 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190155 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190156 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190158 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190161 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190163 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190166 | 1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190167 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190169 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190172 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190174 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190175 | 0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190178 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190179 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190181 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190183 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190186 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190187 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190189 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190193 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190200 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190201 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73190202 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192105 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192107 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192115 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192120 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192122 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192124 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192125 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192126 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192134 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192141 | 0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192143 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192144 | 0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192145 | 0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192149 | 0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192150 | 0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192151 | 0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192152 | 0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73192153 | 0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7777343 | 0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs818619 | 0.93[EUR][1000 genomes] |
| rs818620 | 0.94[EUR][1000 genomes] |
| rs818621 | 0.94[EUR][1000 genomes] |
| rs818628 | 0.85[EUR][1000 genomes] |
| rs9769403 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv2757233 | chr7:104758250-105208492 | Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 39 gene(s) | inside rSNPs | diseases |
| 2 | esv2759549 | chr7:104758250-105208492 | Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 39 gene(s) | inside rSNPs | diseases |
| 3 | nsv1028228 | chr7:104807207-105182998 | Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 39 gene(s) | inside rSNPs | diseases |
| 4 | nsv1015688 | chr7:104849770-105182998 | Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 38 gene(s) | inside rSNPs | diseases |
| 5 | nsv1023767 | chr7:104931143-105190662 | Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 35 gene(s) | inside rSNPs | diseases |
| 6 | nsv539049 | chr7:104931143-105190662 | Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 35 gene(s) | inside rSNPs | diseases |
| 7 | nsv1022065 | chr7:104997315-105190662 | Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
| 8 | nsv888930 | chr7:105012975-105170476 | Enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 30 gene(s) | inside rSNPs | diseases |
| 9 | nsv888931 | chr7:105012975-105173974 | Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
| 10 | nsv888932 | chr7:105012975-105179756 | Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
| 11 | nsv888933 | chr7:105012975-105193051 | Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
| 12 | nsv1023564 | chr7:105018484-105182998 | Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
| 13 | nsv464668 | chr7:105088693-105208492 | Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 30 gene(s) | inside rSNPs | diseases |
| 14 | nsv608069 | chr7:105088693-105208492 | Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 30 gene(s) | inside rSNPs | diseases |
| 15 | nsv888935 | chr7:105110990-105193051 | Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 30 gene(s) | inside rSNPs | diseases |
| 16 | nsv888936 | chr7:105119308-105193051 | Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 30 gene(s) | inside rSNPs | diseases |
| 17 | esv1793037 | chr7:105137305-105167132 | Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 27 gene(s) | inside rSNPs | diseases |
| 18 | nsv8197 | chr7:105160920-105166965 | Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 26 gene(s) | inside rSNPs | diseases |
| 19 | esv3442564 | chr7:105163586-105163932 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 9 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:105163200-105165200 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr7:105163200-105167800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 3 | chr7:105163200-105171800 | Weak transcription | Thymus | Thymus |
| 4 | chr7:105163400-105163800 | Enhancers | Fetal Muscle Trunk | muscle |
| 5 | chr7:105163400-105163800 | Enhancers | K562 | blood |
| 6 | chr7:105163400-105165200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 7 | chr7:105163400-105165400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 8 | chr7:105163400-105167600 | Weak transcription | A549 | lung |
| 9 | chr7:105163400-105171600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 10 | chr7:105163600-105163800 | Enhancers | HepG2 | liver |
| 11 | chr7:105163600-105165200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 12 | chr7:105163600-105165400 | Weak transcription | GM12878-XiMat | blood |





