Variant report

Variant	rs73192151
Chromosome Location	chr7:105211876-105211877
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105171919..105174630-chr7:105210042..105212382,2	K562	blood:
2	chr7:105211821..105212502-chr7:105710387..105710888,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RINT1-3	chr7:105211530-105214107	ENSG00000272604.1

Variant related genes	Relation type
ENSG00000135249	Chromatin interaction

Extended variants
information (count: 98 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:98)

rs_ID	r²[population]
rs11556986	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1355614	0.82[EUR][1000 genomes]
rs1569134	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1706908	0.82[EUR][1000 genomes]
rs1721500	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17343556	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1976969	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2392749	0.81[EUR][1000 genomes]
rs3892297	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3892298	0.96[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4074939	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4083246	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55691539	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55700120	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55701318	1.00[ASN][1000 genomes]
rs55740553	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55794529	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55825845	0.87[AMR][1000 genomes]
rs55906043	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55922564	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55967123	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55983796	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56055535	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56144672	1.00[ASN][1000 genomes]
rs56165465	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56177071	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56230603	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56239334	0.87[AMR][1000 genomes]
rs56251768	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56268110	0.85[AMR][1000 genomes]
rs56379434	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57492756	1.00[ASN][1000 genomes]
rs58194204	1.00[ASN][1000 genomes]
rs68153235	0.80[EUR][1000 genomes]
rs6943132	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6944787	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6953851	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6955796	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6956234	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6956249	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6957192	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6957424	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6961233	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6961863	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6969426	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6973263	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6973974	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6977748	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs711430	0.82[EUR][1000 genomes]
rs73190133	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190149	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190151	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190155	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190156	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190158	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190161	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190163	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190166	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190167	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190169	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190172	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190174	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190175	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73190178	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73190179	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190181	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190183	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190184	0.96[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190186	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190187	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190189	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190193	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190200	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190201	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73190202	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192105	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192107	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192115	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192120	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192122	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192124	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192125	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192126	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192134	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192141	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192143	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192144	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192145	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192149	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192150	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192152	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192153	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7777343	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs818619	0.81[EUR][1000 genomes]
rs818620	0.82[EUR][1000 genomes]
rs818621	0.82[EUR][1000 genomes]
rs818628	0.87[EUR][1000 genomes]
rs9769403	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105174000-105212200	Weak transcription	Fetal Heart	heart
2	chr7:105174200-105213800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr7:105174600-105213200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr7:105188000-105214200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr7:105193200-105221400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr7:105193200-105221600	Weak transcription	Aorta	Aorta
7	chr7:105196000-105221600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr7:105196200-105212200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr7:105199400-105221600	Weak transcription	Pancreas	Pancrea
10	chr7:105201000-105217600	Weak transcription	HSMMtube	muscle
11	chr7:105201000-105221600	Weak transcription	Colonic Mucosa	Colon
12	chr7:105202000-105221600	Weak transcription	Esophagus	oesophagus
13	chr7:105205200-105212600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr7:105205400-105221400	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr7:105205600-105221600	Weak transcription	Primary hematopoietic stem cells	blood
16	chr7:105206200-105221600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
17	chr7:105206200-105221600	Weak transcription	HUVEC	blood vessel
18	chr7:105206400-105212600	Weak transcription	Fetal Brain Male	brain
19	chr7:105206400-105218200	Weak transcription	Colon Smooth Muscle	Colon
20	chr7:105206400-105221400	Weak transcription	Brain Hippocampus Middle	brain
21	chr7:105206400-105221600	Weak transcription	Fetal Kidney	kidney
22	chr7:105206600-105218200	Weak transcription	Fetal Muscle Trunk	muscle
23	chr7:105207000-105221400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr7:105207000-105221400	Weak transcription	Fetal Brain Female	brain
25	chr7:105207000-105221800	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr7:105208200-105221600	Weak transcription	HepG2	liver
27	chr7:105208400-105212000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr7:105208400-105214400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr7:105208400-105221400	Weak transcription	Cortex derived primary cultured neurospheres	brain
30	chr7:105208400-105221600	Weak transcription	NHDF-Ad	bronchial
31	chr7:105208600-105212400	Weak transcription	Spleen	Spleen
32	chr7:105208600-105213000	Weak transcription	Placenta	Placenta
33	chr7:105208600-105213400	Weak transcription	HMEC	breast
34	chr7:105208600-105214000	Weak transcription	Stomach Smooth Muscle	stomach
35	chr7:105208600-105217600	Weak transcription	Fetal Lung	lung
36	chr7:105208600-105218800	Weak transcription	Muscle Satellite Cultured Cells	--
37	chr7:105208600-105219600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr7:105208600-105221200	Weak transcription	Brain Cingulate Gyrus	brain
39	chr7:105208600-105221400	Weak transcription	Brain Germinal Matrix	brain
40	chr7:105208600-105221400	Weak transcription	NH-A	brain
41	chr7:105208600-105221600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr7:105208600-105221600	Weak transcription	Primary neutrophils fromperipheralblood	blood
43	chr7:105208600-105221600	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr7:105208600-105221600	Weak transcription	Right Ventricle	heart
45	chr7:105208800-105215200	Weak transcription	Hela-S3	cervix
46	chr7:105208800-105216400	Weak transcription	Ovary	ovary
47	chr7:105208800-105220600	Weak transcription	H1 Cell Line	embryonic stem cell
48	chr7:105209000-105212000	Weak transcription	NHEK	skin
49	chr7:105209200-105212400	Weak transcription	HUES6 Cell Line	embryonic stem cell
50	chr7:105209200-105212600	Weak transcription	Rectal Smooth Muscle	rectum

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