Variant report

Variant	rs73256943
Chromosome Location	chr8:63710040-63710041
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1351363	1.00[ASN][1000 genomes]
rs16929308	1.00[EUR][1000 genomes]
rs16929351	1.00[EUR][1000 genomes]
rs16929371	1.00[EUR][1000 genomes]
rs16929390	1.00[EUR][1000 genomes]
rs16929420	1.00[ASN][1000 genomes]
rs16929430	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16929437	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2101043	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2101044	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2127581	1.00[EUR][1000 genomes]
rs28510229	1.00[ASN][1000 genomes]
rs57900808	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58391948	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58717549	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60709086	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73256928	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73256936	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73256979	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73264897	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73266909	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73266967	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831341	chr8:63658694-63852213	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1033527	chr8:63673915-64073735	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv521804	chr8:63705238-63758070	Active TSS Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv890961	chr8:63708519-63773787	Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv890962	chr8:63708519-63812686	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	esv3342180	chr8:63709447-63734873	Active TSS Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63709400-63710400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:63710000-63710200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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