Variant report

Variant	rs73260392
Chromosome Location	chr14:37543962-37543963
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:37538918..37541164-chr14:37542653..37544836,2	K562	blood:
2	chr14:37542425..37544923-chr14:37546553..37548254,2	K562	blood:
3	chr14:37543104..37544844-chr14:37552130..37554512,2	MCF-7	breast:

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11846664	1.00[EUR][1000 genomes]
rs17105856	1.00[EUR][1000 genomes]
rs17105876	1.00[EUR][1000 genomes]
rs17105909	1.00[EUR][1000 genomes]
rs17105921	1.00[EUR][1000 genomes]
rs17105928	1.00[EUR][1000 genomes]
rs17105938	1.00[EUR][1000 genomes]
rs17105941	1.00[EUR][1000 genomes]
rs17105991	1.00[EUR][1000 genomes]
rs17105999	1.00[EUR][1000 genomes]
rs17106020	1.00[EUR][1000 genomes]
rs17106194	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17106252	1.00[EUR][1000 genomes]
rs17106300	1.00[EUR][1000 genomes]
rs17106370	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17106427	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17106428	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17106431	1.00[EUR][1000 genomes]
rs2093087	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2144319	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55764696	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55987900	1.00[EUR][1000 genomes]
rs56167909	1.00[EUR][1000 genomes]
rs56395950	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57432181	1.00[EUR][1000 genomes]
rs57545427	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60179583	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60717098	1.00[EUR][1000 genomes]
rs60846053	1.00[EUR][1000 genomes]
rs60910364	1.00[EUR][1000 genomes]
rs61200961	1.00[EUR][1000 genomes]
rs7141866	1.00[EUR][1000 genomes]
rs7147703	1.00[EUR][1000 genomes]
rs73256266	1.00[EUR][1000 genomes]
rs73256270	1.00[EUR][1000 genomes]
rs73256271	1.00[EUR][1000 genomes]
rs73256284	1.00[EUR][1000 genomes]
rs73256290	1.00[EUR][1000 genomes]
rs73256295	1.00[EUR][1000 genomes]
rs73258212	1.00[EUR][1000 genomes]
rs73260317	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73264172	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73266178	1.00[EUR][1000 genomes]
rs74045252	1.00[EUR][1000 genomes]
rs74045477	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8009539	1.00[EUR][1000 genomes]
rs8009729	1.00[EUR][1000 genomes]
rs8012371	0.85[AFR][1000 genomes]
rs9671258	1.00[EUR][1000 genomes]
rs9672077	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534288	chr14:37254539-37697745	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1037719	chr14:37498841-37546359	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1048854	chr14:37505438-37546359	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:37542200-37544400	Enhancers	K562	blood

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