Variant report

Variant	rs73264859
Chromosome Location	chr8:63578459-63578460
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1471516	0.92[EUR][1000 genomes]
rs16929282	0.81[EUR][1000 genomes]
rs16929298	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16929301	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16929312	0.94[EUR][1000 genomes]
rs16929361	0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16929386	0.87[EUR][1000 genomes]
rs16929397	0.81[EUR][1000 genomes]
rs1871591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28663458	0.89[EUR][1000 genomes]
rs35460576	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58817091	0.87[EUR][1000 genomes]
rs59260185	0.88[EUR][1000 genomes]
rs6991546	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7835219	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9298066	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831340	chr8:63515126-63702660	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv890960	chr8:63516962-63629549	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63572400-63602600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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