Variant report

Variant	rs73268738
Chromosome Location	chr14:65459829-65459830
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:65453711..65455869-chr14:65458953..65461488,2	K562	blood:
2	chr14:65453870..65455792-chr14:65457686..65460639,2	K562	blood:
3	chr14:65380037..65382613-chr14:65459677..65461843,2	MCF-7	breast:
4	chr14:65388523..65390556-chr14:65459399..65461527,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000258289	Chromatin interaction
ENSG00000257365	Chromatin interaction
ENSG00000125954	Chromatin interaction

rs_ID	r²[population]
rs2296319	1.00[AMR][1000 genomes]
rs2296321	1.00[AMR][1000 genomes]
rs3825642	0.85[AMR][1000 genomes]
rs59352265	1.00[AMR][1000 genomes]
rs59450659	1.00[AMR][1000 genomes]
rs60577293	1.00[AMR][1000 genomes]
rs60830527	1.00[AMR][1000 genomes]
rs73268724	1.00[AMR][1000 genomes]
rs73268734	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73268737	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73268746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73268754	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73268758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73268763	1.00[AMR][1000 genomes]
rs73268765	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73268767	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73268773	1.00[AMR][1000 genomes]
rs73268780	1.00[AMR][1000 genomes]
rs73268784	1.00[AMR][1000 genomes]
rs73268798	1.00[AMR][1000 genomes]
rs73270803	1.00[AMR][1000 genomes]
rs73270817	1.00[AMR][1000 genomes]
rs73270823	1.00[AMR][1000 genomes]
rs73270827	1.00[AMR][1000 genomes]
rs73270829	0.83[AMR][1000 genomes]
rs73270833	1.00[AMR][1000 genomes]
rs73270838	1.00[AMR][1000 genomes]

Chromatin state (count:85 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65454400-65472600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:65454600-65464000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:65454600-65470200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:65454600-65470600	Weak transcription	Fetal Muscle Trunk	muscle
5	chr14:65454600-65472200	Weak transcription	Esophagus	oesophagus
6	chr14:65454800-65464000	Weak transcription	Fetal Brain Female	brain
7	chr14:65454800-65464400	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr14:65454800-65469600	Weak transcription	Brain Angular Gyrus	brain
9	chr14:65454800-65473000	Weak transcription	Fetal Kidney	kidney
10	chr14:65454800-65478200	Weak transcription	Brain Cingulate Gyrus	brain
11	chr14:65454800-65478400	Weak transcription	Brain Anterior Caudate	brain
12	chr14:65454800-65482800	Weak transcription	Rectal Smooth Muscle	rectum
13	chr14:65454800-65513800	Weak transcription	Stomach Mucosa	stomach
14	chr14:65455000-65461800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr14:65455000-65463600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr14:65455000-65463800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr14:65455000-65464000	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr14:65455000-65465000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr14:65455000-65465000	Weak transcription	Osteobl	bone
20	chr14:65455000-65470800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr14:65455200-65461200	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr14:65455200-65463800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr14:65455200-65463800	Weak transcription	NHEK	skin
24	chr14:65455200-65464000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr14:65455200-65464400	Weak transcription	NHDF-Ad	bronchial
26	chr14:65455200-65465000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr14:65455200-65469400	Weak transcription	Fetal Lung	lung
28	chr14:65455200-65469400	Weak transcription	K562	blood
29	chr14:65455200-65476000	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr14:65455200-65479000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr14:65455400-65464000	Weak transcription	Adipose Nuclei	Adipose
32	chr14:65455400-65464000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
33	chr14:65455600-65464800	Weak transcription	A549	lung
34	chr14:65455600-65473000	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr14:65455600-65478400	Weak transcription	Brain Germinal Matrix	brain
36	chr14:65456200-65462400	Enhancers	Primary monocytes fromperipheralblood	blood
37	chr14:65456800-65460000	Enhancers	HepG2	liver
38	chr14:65457000-65465200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
39	chr14:65457200-65460000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
40	chr14:65457200-65460000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
41	chr14:65457200-65464000	Weak transcription	Right Atrium	heart
42	chr14:65457200-65472200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr14:65457200-65472400	Weak transcription	Skeletal Muscle Female	skeletal muscle
44	chr14:65457400-65461200	Weak transcription	HUVEC	blood vessel
45	chr14:65457400-65461800	Weak transcription	Fetal Intestine Large	intestine
46	chr14:65457400-65464200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr14:65457400-65471000	Weak transcription	Thymus	Thymus
48	chr14:65457400-65476600	Weak transcription	Brain Inferior Temporal Lobe	brain
49	chr14:65457600-65461000	Weak transcription	Duodenum Mucosa	Duodenum
50	chr14:65457600-65464000	Weak transcription	Psoas Muscle	Psoas

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