Variant report

Variant	rs73270847
Chromosome Location	chr14:65521158-65521159
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11851530	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2296314	0.86[ASN][1000 genomes]
rs2296320	0.86[ASN][1000 genomes]
rs60233922	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73270852	0.92[AFR][1000 genomes]
rs73270859	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65464400-65521200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:65470400-65539600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr14:65471200-65546200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr14:65483400-65528000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr14:65493000-65521400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr14:65496800-65521200	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr14:65501800-65543200	Weak transcription	Fetal Brain Male	brain
8	chr14:65502000-65521200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr14:65502400-65523400	Weak transcription	Right Atrium	heart
10	chr14:65508200-65530800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
11	chr14:65508400-65521200	Weak transcription	Rectal Smooth Muscle	rectum
12	chr14:65508400-65527800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr14:65508400-65527800	Weak transcription	Colonic Mucosa	Colon
14	chr14:65508400-65528000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr14:65508600-65530800	Weak transcription	NHDF-Ad	bronchial
16	chr14:65508600-65542000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr14:65508800-65521400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr14:65509600-65528000	Weak transcription	Fetal Kidney	kidney
19	chr14:65510000-65521200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr14:65510200-65527800	Weak transcription	Primary B cells from peripheral blood	blood
21	chr14:65511400-65521200	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr14:65511600-65521200	Weak transcription	Brain Substantia Nigra	brain
23	chr14:65511600-65521200	Weak transcription	Pancreas	Pancrea
24	chr14:65511600-65521400	Weak transcription	Osteobl	bone
25	chr14:65511600-65528600	Weak transcription	NH-A	brain
26	chr14:65511800-65527800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr14:65512000-65521200	Weak transcription	Primary B cells from cord blood	blood
28	chr14:65512000-65521200	Weak transcription	Brain Anterior Caudate	brain
29	chr14:65512000-65521200	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr14:65512600-65521200	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr14:65514200-65521200	Weak transcription	Liver	Liver
32	chr14:65514400-65521200	Weak transcription	HUES64 Cell Line	embryonic stem cell
33	chr14:65514400-65521400	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr14:65514600-65521200	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr14:65514600-65521200	Weak transcription	HUES6 Cell Line	embryonic stem cell
36	chr14:65514600-65521200	Weak transcription	HSMM	muscle
37	chr14:65514600-65523200	Weak transcription	K562	blood
38	chr14:65514600-65527600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
39	chr14:65514600-65527600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
40	chr14:65514600-65527600	Weak transcription	GM12878-XiMat	blood
41	chr14:65514800-65527800	Weak transcription	Colon Smooth Muscle	Colon
42	chr14:65514800-65536200	Weak transcription	Small Intestine	intestine
43	chr14:65515200-65528000	Weak transcription	HUVEC	blood vessel
44	chr14:65515200-65528600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr14:65515200-65530000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr14:65515400-65527800	Weak transcription	Hela-S3	cervix
47	chr14:65515400-65527800	Weak transcription	NHEK	skin
48	chr14:65515600-65527800	Weak transcription	HMEC	breast
49	chr14:65517200-65524000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr14:65517400-65523600	Weak transcription	Psoas Muscle	Psoas

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