Variant report

Variant	rs73285258
Chromosome Location	chr14:70278174-70278175
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10134553	1.00[ASN][1000 genomes]
rs10151946	1.00[EUR][1000 genomes]
rs10450925	1.00[ASN][1000 genomes]
rs12896497	1.00[ASN][1000 genomes]
rs17107278	1.00[ASN][1000 genomes]
rs17107328	1.00[EUR][1000 genomes]
rs28607349	1.00[ASN][1000 genomes]
rs56203918	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57714406	1.00[EUR][1000 genomes]
rs58712157	1.00[EUR][1000 genomes]
rs73283334	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285246	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285283	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285287	1.00[EUR][1000 genomes]
rs73286913	1.00[EUR][1000 genomes]
rs8014019	1.00[ASN][1000 genomes]
rs9323529	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70274000-70279200	Weak transcription	Hela-S3	cervix
2	chr14:70275400-70278200	Enhancers	Fetal Intestine Large	intestine
3	chr14:70275400-70280000	Enhancers	Liver	Liver
4	chr14:70275600-70278400	Enhancers	Placenta	Placenta
5	chr14:70276400-70278400	Weak transcription	Stomach Mucosa	stomach
6	chr14:70277800-70278400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:70277800-70280200	Weak transcription	Fetal Intestine Small	intestine
8	chr14:70278000-70278200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr14:70278000-70278200	Enhancers	Gastric	stomach
10	chr14:70278000-70278400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr14:70278000-70279000	Flanking Active TSS	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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