The 2.0 version of rSNPBase

Variant report

Variant rs73288738
Chromosome Location chr12:11860218-11860219
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11827400-11879800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:11838800-11872200 Weak transcription Primary T cells from cord blood blood
3 chr12:11841800-11867400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr12:11844200-11864600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr12:11848000-11872200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr12:11848400-11861200 Weak transcription Primary B cells from peripheral blood blood
7 chr12:11848800-11861400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:11848800-11879600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr12:11849400-11865000 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr12:11851200-11861000 Weak transcription Primary B cells from cord blood blood
11 chr12:11853000-11872000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr12:11853200-11870400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr12:11854800-11872600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr12:11855200-11861200 Weak transcription Dnd41 blood
15 chr12:11855200-11862600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr12:11855200-11864000 Weak transcription Adipose Nuclei Adipose
17 chr12:11855200-11871800 Weak transcription H9 Cell Line embryonic stem cell
18 chr12:11855400-11868200 Weak transcription Primary T cells fromperipheralblood blood
19 chr12:11857000-11861200 Enhancers Small Intestine intestine
20 chr12:11857000-11861600 Enhancers Stomach Mucosa stomach
21 chr12:11857000-11861800 Strong transcription Primary hematopoietic stem cells blood
22 chr12:11857000-11876800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr12:11857200-11860600 Strong transcription GM12878-XiMat blood
24 chr12:11857600-11864200 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr12:11857800-11860400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr12:11857800-11860800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr12:11857800-11860800 Enhancers Cortex derived primary cultured neurospheres brain
28 chr12:11857800-11860800 Enhancers Brain Anterior Caudate brain
29 chr12:11857800-11860800 Enhancers NHEK skin
30 chr12:11857800-11861000 Enhancers HMEC breast
31 chr12:11857800-11865200 Enhancers Colon Smooth Muscle Colon
32 chr12:11858000-11860800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr12:11858000-11861400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr12:11858000-11861400 Enhancers Brain Hippocampus Middle brain
35 chr12:11858000-11861600 Enhancers Fetal Stomach stomach
36 chr12:11858000-11862000 Enhancers Fetal Heart heart
37 chr12:11858000-11862800 Enhancers Pancreas Pancrea
38 chr12:11858000-11863400 Enhancers Skeletal Muscle Female skeletal muscle
39 chr12:11858000-11864000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr12:11858000-11864000 Genic enhancers Fetal Thymus thymus
41 chr12:11858400-11860600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr12:11858400-11860600 Weak transcription Spleen Spleen
43 chr12:11858400-11860800 Enhancers Duodenum Smooth Muscle Duodenum
44 chr12:11858400-11861600 Enhancers Liver Liver
45 chr12:11858400-11861600 Enhancers Duodenum Mucosa Duodenum
46 chr12:11858600-11860600 Enhancers Fetal Intestine Large intestine
47 chr12:11858600-11860800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr12:11858600-11861000 Enhancers Left Ventricle heart
49 chr12:11858600-11861400 Enhancers Rectal Mucosa Donor 31 rectum
50 chr12:11858600-11861800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015