The 2.0 version of rSNPBase

Variant report

Variant rs73288748
Chromosome Location chr12:11862187-11862188
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11827400-11879800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:11838800-11872200 Weak transcription Primary T cells from cord blood blood
3 chr12:11841800-11867400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr12:11844200-11864600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr12:11848000-11872200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr12:11848800-11879600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr12:11849400-11865000 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr12:11853000-11872000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr12:11853200-11870400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr12:11854800-11872600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr12:11855200-11862600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr12:11855200-11864000 Weak transcription Adipose Nuclei Adipose
13 chr12:11855200-11871800 Weak transcription H9 Cell Line embryonic stem cell
14 chr12:11855400-11868200 Weak transcription Primary T cells fromperipheralblood blood
15 chr12:11857000-11876800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr12:11857600-11864200 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr12:11857800-11865200 Enhancers Colon Smooth Muscle Colon
18 chr12:11858000-11862800 Enhancers Pancreas Pancrea
19 chr12:11858000-11863400 Enhancers Skeletal Muscle Female skeletal muscle
20 chr12:11858000-11864000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr12:11858000-11864000 Genic enhancers Fetal Thymus thymus
22 chr12:11858600-11863000 Weak transcription Primary monocytes fromperipheralblood blood
23 chr12:11858600-11870400 Weak transcription NHLF lung
24 chr12:11858800-11862800 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr12:11858800-11864600 Weak transcription HUVEC blood vessel
26 chr12:11859200-11864000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:11859200-11872000 Weak transcription HSMMtube muscle
28 chr12:11859800-11862400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr12:11859800-11864200 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr12:11860000-11867600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr12:11860000-11869800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr12:11860200-11864200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr12:11860400-11863200 Weak transcription HepG2 liver
34 chr12:11860400-11864000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr12:11860400-11871600 Weak transcription Placenta Placenta
36 chr12:11860600-11864200 Weak transcription Brain Cingulate Gyrus brain
37 chr12:11860600-11865000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr12:11860600-11868400 Weak transcription Fetal Intestine Large intestine
39 chr12:11860600-11869400 Weak transcription NH-A brain
40 chr12:11860800-11863800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr12:11860800-11864200 Weak transcription Brain Anterior Caudate brain
42 chr12:11860800-11864200 Weak transcription Brain Inferior Temporal Lobe brain
43 chr12:11860800-11864600 Enhancers Stomach Smooth Muscle stomach
44 chr12:11860800-11865400 Enhancers Rectal Smooth Muscle rectum
45 chr12:11860800-11869400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr12:11860800-11869400 Weak transcription Esophagus oesophagus
47 chr12:11860800-11869400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr12:11860800-11869600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr12:11860800-11869800 Weak transcription Colonic Mucosa Colon
50 chr12:11860800-11869800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015