Variant report

Variant	rs73290755
Chromosome Location	chr14:70481108-70481109
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:70475248..70477475-chr14:70478520..70481359,3	MCF-7	breast:
2	chr14:70464835..70467780-chr14:70480239..70482134,2	MCF-7	breast:
3	chr14:70438502..70441273-chr14:70479429..70481883,2	K562	blood:
4	chr14:70480962..70481548-chr14:70494329..70495228,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11846426	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
3	nsv832824	chr14:70320639-70511401	Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70457800-70484800	Weak transcription	Brain Substantia Nigra	brain
2	chr14:70459000-70484800	Weak transcription	Gastric	stomach
3	chr14:70466200-70484800	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr14:70468400-70484400	Weak transcription	A549	lung
5	chr14:70469800-70484800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr14:70472200-70481400	Weak transcription	Fetal Muscle Leg	muscle
7	chr14:70472400-70485400	Strong transcription	Hela-S3	cervix
8	chr14:70475800-70484800	Weak transcription	Brain Hippocampus Middle	brain
9	chr14:70475800-70487200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr14:70476000-70500000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr14:70476200-70482200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr14:70476200-70490600	Weak transcription	Fetal Brain Male	brain
13	chr14:70476200-70499000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr14:70477000-70483000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr14:70477000-70484200	Strong transcription	Cortex derived primary cultured neurospheres	brain
16	chr14:70477400-70484600	Weak transcription	Fetal Stomach	stomach
17	chr14:70478000-70481400	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr14:70478400-70481400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr14:70478400-70484200	Weak transcription	NHEK	skin
20	chr14:70478400-70484800	Weak transcription	Brain Anterior Caudate	brain
21	chr14:70478600-70484200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr14:70478600-70484400	Weak transcription	Spleen	Spleen
23	chr14:70479000-70484000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr14:70480000-70484600	Strong transcription	Liver	Liver
25	chr14:70480200-70481600	Genic enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr14:70480400-70481600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr14:70480400-70482000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr14:70480600-70481200	Strong transcription	Fetal Brain Female	brain
29	chr14:70480600-70481400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr14:70480600-70481800	Weak transcription	HUES64 Cell Line	embryonic stem cell
31	chr14:70480600-70482000	Genic enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr14:70480600-70482200	Strong transcription	HepG2	liver
33	chr14:70480800-70481600	Strong transcription	Brain Germinal Matrix	brain
34	chr14:70481000-70485200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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