Variant report

Variant	rs73320687
Chromosome Location	chr12:68270799-68270800
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12309271	1.00[EUR][1000 genomes]
rs2860600	1.00[EUR][1000 genomes]
rs2906861	1.00[EUR][1000 genomes]
rs57329873	1.00[EUR][1000 genomes]
rs58233262	1.00[EUR][1000 genomes]
rs58752621	1.00[EUR][1000 genomes]
rs58828387	1.00[EUR][1000 genomes]
rs7297341	1.00[EUR][1000 genomes]
rs74099722	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3411149	chr12:68066948-68435533	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:68270000-68271000	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr12:68270000-68271200	Enhancers	H1 Cell Line	embryonic stem cell
3	chr12:68270000-68271400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:68270200-68270800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
5	chr12:68270200-68271000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
6	chr12:68270200-68271000	Enhancers	H9 Cell Line	embryonic stem cell
7	chr12:68270200-68271000	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr12:68270200-68271000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr12:68270200-68271600	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr12:68270200-68272800	Enhancers	Fetal Intestine Small	intestine
11	chr12:68270400-68272800	Enhancers	Fetal Intestine Large	intestine
12	chr12:68270600-68270800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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