Variant report

Variant	rs73339859
Chromosome Location	chr17:63437452-63437453
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs59720903	1.00[EUR][1000 genomes]
rs60028782	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60529904	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60799116	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7213593	1.00[EUR][1000 genomes]
rs7215910	0.92[ASN][1000 genomes]
rs7219534	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339861	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339873	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73339874	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73339881	0.92[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63435000-63441800	Weak transcription	Lung	lung
2	chr17:63435400-63438400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr17:63435400-63439400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr17:63435400-63444400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr17:63435600-63437600	Enhancers	HepG2	liver
6	chr17:63436800-63438800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr17:63437000-63438000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr17:63437200-63437600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
9	chr17:63437200-63437600	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr17:63437200-63437800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr17:63437400-63437600	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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