Variant report

Variant	rs733454
Chromosome Location	chr11:76477721-76477722
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:76155468..76156969-chr11:76476055..76478138,2	MCF-7	breast:
2	chr11:76475812..76477877-chr11:76571809..76573437,2	MCF-7	breast:
3	chr11:76448672..76451202-chr11:76476087..76478426,2	MCF-7	breast:
4	chr11:76457361..76460008-chr11:76475009..76477808,2	MCF-7	breast:
5	chr11:76476664..76478298-chr11:76488462..76489979,2	K562	blood:
6	chr11:76477441..76478991-chr11:76479853..76482117,2	K562	blood:
7	chr11:76475599..76479568-chr11:76492254..76495485,3	K562	blood:

Variant related genes	Relation type
ENSG00000182704	Chromatin interaction
ENSG00000158636	Chromatin interaction
ENSG00000255135	Chromatin interaction
ENSG00000078124	Chromatin interaction
ENSG00000255100	Chromatin interaction

rs_ID	r²[population]
rs1149597	1.00[ASW][hapmap]
rs1149599	1.00[ASW][hapmap]
rs1149618	1.00[ASW][hapmap]
rs1224955	1.00[ASW][hapmap]
rs12577786	1.00[ASW][hapmap]
rs60651758	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76467800-76478400	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr11:76470200-76479000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr11:76470600-76482000	Weak transcription	Psoas Muscle	Psoas
4	chr11:76473000-76478600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:76473600-76483200	Enhancers	Esophagus	oesophagus
6	chr11:76473800-76479200	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr11:76474000-76478800	Enhancers	Duodenum Mucosa	Duodenum
8	chr11:76474000-76481000	Enhancers	Fetal Muscle Trunk	muscle
9	chr11:76474000-76481200	Enhancers	Spleen	Spleen
10	chr11:76474000-76485600	Enhancers	Left Ventricle	heart
11	chr11:76474200-76478200	Enhancers	Right Ventricle	heart
12	chr11:76474400-76485400	Enhancers	Fetal Muscle Leg	muscle
13	chr11:76475000-76478800	Enhancers	Fetal Heart	heart
14	chr11:76475000-76480800	Enhancers	Fetal Brain Male	brain
15	chr11:76475200-76478200	Weak transcription	Stomach Smooth Muscle	stomach
16	chr11:76475200-76479000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr11:76475200-76479000	Weak transcription	K562	blood
18	chr11:76475400-76478200	Weak transcription	Small Intestine	intestine
19	chr11:76475400-76478600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr11:76475400-76478600	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr11:76475400-76478600	Weak transcription	HUES6 Cell Line	embryonic stem cell
22	chr11:76475400-76478600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr11:76475400-76478800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr11:76475400-76478800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
25	chr11:76475400-76478800	Weak transcription	Brain Angular Gyrus	brain
26	chr11:76475400-76479000	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr11:76475400-76479000	Weak transcription	Rectal Smooth Muscle	rectum
28	chr11:76475400-76479200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr11:76475400-76479200	Weak transcription	NHDF-Ad	bronchial
30	chr11:76475400-76479400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr11:76475400-76481800	Weak transcription	Colon Smooth Muscle	Colon
32	chr11:76475600-76478800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
33	chr11:76475600-76479800	Weak transcription	Brain Anterior Caudate	brain
34	chr11:76475800-76478600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr11:76475800-76478800	Weak transcription	Brain Germinal Matrix	brain
36	chr11:76475800-76479000	Weak transcription	HSMM	muscle
37	chr11:76475800-76479000	Weak transcription	Osteobl	bone
38	chr11:76476000-76478000	Weak transcription	Hela-S3	cervix
39	chr11:76476000-76478400	Weak transcription	HMEC	breast
40	chr11:76476000-76479000	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr11:76476000-76479000	Weak transcription	HUVEC	blood vessel
42	chr11:76476200-76478400	Weak transcription	NHEK	skin
43	chr11:76476200-76485600	Enhancers	Fetal Intestine Large	intestine
44	chr11:76476400-76478400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr11:76476400-76479000	Weak transcription	Gastric	stomach
46	chr11:76476400-76479200	Weak transcription	Cortex derived primary cultured neurospheres	brain
47	chr11:76476400-76484400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr11:76476400-76485200	Enhancers	Fetal Intestine Small	intestine
49	chr11:76476600-76478400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
50	chr11:76476800-76478200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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