Variant report

Variant	rs73408058
Chromosome Location	chr7:101758375-101758376
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:101757440..101759517-chr7:101762519..101765304,2	K562	blood:
2	chr7:101752221..101755453-chr7:101756751..101759873,4	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs104933	0.83[EUR][1000 genomes]
rs11972888	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11973970	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11977667	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11982785	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16869529	0.85[EUR][1000 genomes]
rs17135027	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17135076	0.83[EUR][1000 genomes]
rs1734614	0.83[EUR][1000 genomes]
rs2051962	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2529097	0.83[EUR][1000 genomes]
rs34746794	0.83[EUR][1000 genomes]
rs364466	0.83[EUR][1000 genomes]
rs380967	0.86[EUR][1000 genomes]
rs388592	0.83[EUR][1000 genomes]
rs389224	0.83[EUR][1000 genomes]
rs392286	0.83[EUR][1000 genomes]
rs397479	0.83[EUR][1000 genomes]
rs411030	0.83[EUR][1000 genomes]
rs424941	0.83[EUR][1000 genomes]
rs436090	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs442030	0.83[EUR][1000 genomes]
rs446513	0.83[EUR][1000 genomes]
rs59822540	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6969463	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73408028	0.85[EUR][1000 genomes]
rs73408093	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73408094	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs965863	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101708200-101765000	Weak transcription	Small Intestine	intestine
2	chr7:101716400-101758600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr7:101733200-101758600	Weak transcription	Psoas Muscle	Psoas
4	chr7:101738400-101760800	Weak transcription	NHDF-Ad	bronchial
5	chr7:101738600-101758400	Weak transcription	Colon Smooth Muscle	Colon
6	chr7:101738600-101763600	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr7:101738800-101763800	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr7:101738800-101764200	Strong transcription	Fetal Thymus	thymus
9	chr7:101739000-101760600	Weak transcription	NHLF	lung
10	chr7:101739200-101760600	Weak transcription	HSMM	muscle
11	chr7:101739200-101763400	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr7:101740400-101763400	Strong transcription	Dnd41	blood
13	chr7:101740400-101764000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr7:101741000-101765000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr7:101741600-101764800	Weak transcription	Stomach Mucosa	stomach
16	chr7:101744600-101765000	Weak transcription	HUVEC	blood vessel
17	chr7:101745000-101758600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr7:101745600-101758600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr7:101746000-101765000	Weak transcription	HMEC	breast
20	chr7:101746600-101758600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr7:101746600-101764200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
22	chr7:101746800-101759200	Weak transcription	Colonic Mucosa	Colon
23	chr7:101747800-101762800	Weak transcription	Fetal Kidney	kidney
24	chr7:101748600-101758600	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr7:101748600-101765000	Weak transcription	NHEK	skin
26	chr7:101748800-101758600	Weak transcription	K562	blood
27	chr7:101750000-101760400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
28	chr7:101750200-101771000	Weak transcription	Fetal Heart	heart
29	chr7:101750400-101758600	Weak transcription	Rectal Smooth Muscle	rectum
30	chr7:101751000-101759000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr7:101751400-101758400	Weak transcription	Duodenum Smooth Muscle	Duodenum
32	chr7:101751400-101758600	Weak transcription	Ovary	ovary
33	chr7:101751400-101758600	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr7:101751600-101764800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
35	chr7:101753000-101760600	Strong transcription	Placenta	Placenta
36	chr7:101753400-101760400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr7:101753400-101763600	Strong transcription	Duodenum Mucosa	Duodenum
38	chr7:101753600-101758800	Weak transcription	Pancreatic Islets	Pancreatic Islet
39	chr7:101753600-101761200	Strong transcription	Liver	Liver
40	chr7:101754000-101758400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr7:101754400-101764200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr7:101754600-101758800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr7:101754600-101760200	Strong transcription	Pancreas	Pancrea
44	chr7:101754600-101760600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr7:101754600-101765000	Strong transcription	Fetal Intestine Small	intestine
46	chr7:101754800-101762800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
47	chr7:101754800-101764200	Strong transcription	Thymus	Thymus
48	chr7:101755200-101758400	Weak transcription	Primary hematopoietic stem cells	blood
49	chr7:101755200-101758400	Weak transcription	HSMMtube	muscle
50	chr7:101755200-101758600	Weak transcription	Brain Anterior Caudate	brain

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