Variant report

Variant	rs73416144
Chromosome Location	chr12:87678755-87678756
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs17040813	1.00[AMR][1000 genomes]
rs60069679	1.00[AMR][1000 genomes]
rs73410067	1.00[AMR][1000 genomes]
rs73410102	1.00[AMR][1000 genomes]
rs73411803	0.87[AFR][1000 genomes]
rs73412009	1.00[AMR][1000 genomes]
rs73412012	1.00[AMR][1000 genomes]
rs73412014	1.00[AMR][1000 genomes]
rs73412072	1.00[AMR][1000 genomes]
rs73412073	1.00[AMR][1000 genomes]
rs73412076	1.00[AMR][1000 genomes]
rs73412087	1.00[AMR][1000 genomes]
rs73412095	1.00[AMR][1000 genomes]
rs73414089	1.00[AMR][1000 genomes]
rs73414095	1.00[AMR][1000 genomes]
rs73414099	1.00[AMR][1000 genomes]
rs73414185	1.00[AMR][1000 genomes]
rs73416003	1.00[AMR][1000 genomes]
rs73423452	1.00[AMR][1000 genomes]
rs73425323	1.00[AMR][1000 genomes]
rs73425331	1.00[AMR][1000 genomes]
rs73425341	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916862	chr12:86837694-87718558	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv427918	chr12:87647585-87786660	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:87678200-87681600	Weak transcription	Aorta	Aorta
2	chr12:87678600-87681600	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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