Variant report

rSNPs within LD-proxies of this variant (count:26)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753964	chr13:50545399-51421199	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1256 gene(s)	inside rSNPs	diseases
2	esv2753492	chr13:50550081-51461720	Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1256 gene(s)	inside rSNPs	diseases
3	esv2753864	chr13:51136699-51375199	Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51237400-51245200	Weak transcription	Osteobl	bone
2	chr13:51241000-51245600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr13:51241400-51245200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr13:51241400-51245600	Enhancers	Fetal Thymus	thymus
5	chr13:51241400-51249800	Weak transcription	Right Ventricle	heart
6	chr13:51241600-51244800	Enhancers	Thymus	Thymus
7	chr13:51242000-51244200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr13:51242000-51244200	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr13:51242000-51245800	Enhancers	Fetal Muscle Leg	muscle
10	chr13:51242800-51244200	Enhancers	Dnd41	blood
11	chr13:51243200-51251800	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr13:51243400-51246000	Weak transcription	Brain Hippocampus Middle	brain
13	chr13:51243400-51249800	Weak transcription	Brain Cingulate Gyrus	brain
14	chr13:51243800-51244200	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr13:51243800-51244200	Enhancers	Fetal Muscle Trunk	muscle
16	chr13:51243800-51244600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr13:51243800-51247400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr13:51244000-51244600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr13:51244000-51244800	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr13:51244000-51244800	Enhancers	Left Ventricle	heart
21	chr13:51244000-51244800	Enhancers	Psoas Muscle	Psoas

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