Variant report

Variant	rs73490909
Chromosome Location	chr11:59633244-59633245
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs59035014	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs66980105	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490905	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490914	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490917	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490921	1.00[AMR][1000 genomes]
rs73490922	0.83[AFR][1000 genomes]
rs73490963	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490970	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490973	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490976	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490979	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490984	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73490996	0.86[AFR][1000 genomes]
rs73493107	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73493111	1.00[AMR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59629000-59633600	Weak transcription	K562	blood
2	chr11:59631400-59633800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr11:59631600-59634200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr11:59631800-59633400	Enhancers	HUVEC	blood vessel
5	chr11:59631800-59633400	Enhancers	NHEK	skin
6	chr11:59631800-59634200	Enhancers	HMEC	breast
7	chr11:59632000-59633400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr11:59632200-59633600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr11:59632400-59634400	Enhancers	Hela-S3	cervix
10	chr11:59632800-59633400	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr11:59633000-59634200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
12	chr11:59633200-59634800	Enhancers	Primary monocytes fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links